Protein
View in Explore- Genbank accession
- WQZ49496.1 [GenBank]
- Protein name
- putative glycerophosphoryl diester phosphodiesterase
- RBP type
-
TSP
- Protein sequence
-
MEDFDYTPLSSMRFQAQLGSEVKRMYKEGESVIRLSLARVTKVNYKYNTVEVMTTLHKNSTSKNPSDNGRYSARLPVVFGGRTPQGKVYGSNTIVTIGSLVLIGFLEGNKDHPIVLNIYGDADNQSMLTRTTMTGGDESDEAVQRELWQLFTLYPSMTYQNIDGRGNKEVTFSGKSFMYITDTDPGNEYVQDGAFDYADLPSSRYANGELIEPISPNSPTVLYVHQGIYDNHRVTFFLKSDGTLRVGSRHRNGKGITYQEMKTDGSFSIVQKQDTTNPEEISKKFSKFEISENGDVTIQSPDHKLTITKDGVLIDGKPIGSGGGGGDLEIIKDLQEKVEGVTTQITMVNGKLDFKIDKVEIEIDLDTLRQEQQKVLDAIRAQLDSLSSALKAMKDYTLPAFEDGTVTADEKKKVNELLTAVGREKAKVDEKYSQTISDPFLPATHKDLLTVSKGVLDSRHQALLNTIEIVMLDGVITPDERIAVAQAFDGYEQAIAALDVSFKQAMDAILEARIKEAQENAMKYRDTEMRKIGSQITQLADSITAKVSSEQLSKQIEEVRSEMATKEEQKEIKDTAEKAQKDAEEALKKVPHRIMVGSTNGLIFRNGEIDSVLYAKVYKGDDEVTSTIPTANFFWSRISDDESGDLQWNKDHVGIGSSFKISKDDVPQRATFECDVEVPVS
- Physico‐chemical
properties -
protein length: 681 AA molecular weight: 75745,17950 Da isoelectric point: 5,02817 aromaticity: 0,07048 hydropathy: -0,51278
Domains
Domains [InterPro]
DC_0209
STR
11–680
STR
11–680
SSF69255
ATT
65–117
ATT
65–117
1
681
Architecture
STR 11-64 | ATT 65-117 | STR 118-680 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
681
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 142 | 142 | 0,6635 |
| Central domain | 143 | 612 | 471 | 0,1740 |
| C-terminal | 613 | 681 | 68 | 0,0903 |
Note: Constraints were applied during segmentation.
Fixed 55 C-terminal predictions appearing before Central domain
Fixed 55 C-terminal predictions appearing before Central domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-142
1-142
Central
143-612
143-612
C-terminal
613-681
613-681
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Bacillus phage Z3 [NCBI] |
3110481 | No lineage information |
| Host |
Bacillus cereus [NCBI] |
1396 | cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
WQZ49496.1
[NCBI]
Genbank nucleotide accession
PP003747
[NCBI]
CDS location
range 110178 -> 112223
strand -
strand -
CDS
GTGGAAGATTTTGACTACACACCACTGTCCTCTATGAGGTTTCAGGCTCAACTAGGATCAGAAGTTAAACGTATGTACAAGGAGGGAGAGAGTGTTATTAGGCTCTCCCTTGCTAGGGTTACAAAGGTTAACTATAAGTACAATACAGTGGAAGTTATGACAACACTACATAAGAACTCAACATCAAAGAATCCAAGTGACAACGGACGATACTCTGCTAGACTACCAGTTGTATTCGGTGGACGTACTCCGCAAGGTAAAGTATACGGGTCTAACACAATCGTTACAATCGGATCGTTAGTGTTAATCGGATTCTTAGAAGGTAATAAAGACCACCCTATTGTTTTAAACATCTATGGTGATGCAGATAACCAATCAATGCTAACACGTACAACGATGACAGGTGGAGACGAATCAGACGAAGCAGTCCAACGTGAGCTATGGCAGTTATTCACTTTATACCCTTCTATGACATATCAGAATATTGATGGTCGAGGAAATAAGGAAGTAACTTTCTCAGGTAAGTCATTCATGTATATTACAGACACTGACCCTGGGAATGAATACGTACAGGATGGAGCTTTCGACTACGCAGATTTACCAAGTTCTCGTTATGCAAATGGGGAACTAATCGAACCTATATCTCCGAACTCTCCTACAGTATTATACGTCCACCAAGGTATCTATGACAATCATAGAGTTACCTTCTTCCTTAAATCGGACGGAACGTTACGTGTAGGTAGCAGACATAGAAACGGTAAAGGGATTACATACCAAGAAATGAAAACGGATGGATCGTTCTCTATCGTGCAGAAGCAGGATACTACGAACCCTGAAGAGATTTCTAAAAAGTTTTCTAAGTTTGAAATTTCTGAAAATGGTGATGTTACAATCCAGTCCCCTGACCACAAATTAACTATCACAAAAGATGGTGTTCTGATTGACGGTAAACCAATCGGTTCGGGTGGTGGAGGAGGAGACCTTGAGATTATCAAGGACTTGCAAGAAAAGGTAGAAGGTGTAACCACACAGATAACAATGGTTAACGGTAAGCTAGATTTCAAGATTGATAAAGTTGAGATAGAGATAGACTTGGACACGCTTCGACAGGAGCAACAAAAAGTGTTAGACGCTATCCGAGCACAACTGGACAGTTTATCTAGTGCACTGAAAGCTATGAAAGATTACACGTTACCTGCATTTGAGGATGGTACGGTTACGGCAGATGAAAAGAAGAAAGTTAACGAGCTTCTAACTGCCGTAGGAAGAGAGAAAGCAAAGGTAGACGAGAAGTATAGCCAAACTATCTCCGATCCGTTCTTACCAGCCACACACAAAGATTTATTAACAGTATCGAAGGGTGTACTAGACAGTAGACATCAAGCGTTACTGAACACAATAGAAATCGTTATGTTAGATGGGGTTATCACTCCTGACGAACGTATAGCAGTAGCACAGGCATTCGATGGGTATGAGCAAGCTATCGCTGCTTTAGACGTATCCTTTAAACAGGCAATGGACGCAATCCTTGAAGCCCGTATTAAAGAAGCACAAGAGAATGCTATGAAATACAGAGATACAGAGATGCGTAAAATCGGTTCACAGATTACGCAACTAGCAGACTCTATCACGGCAAAAGTTAGTTCAGAACAACTATCGAAACAGATAGAAGAGGTTCGTTCTGAAATGGCTACAAAAGAAGAACAGAAAGAAATCAAGGACACTGCCGAGAAAGCACAAAAGGATGCAGAAGAAGCCTTGAAGAAGGTACCTCATCGTATCATGGTCGGTAGCACAAATGGTCTTATCTTTAGAAACGGAGAAATAGATAGTGTCCTGTACGCTAAGGTGTACAAAGGAGATGACGAGGTTACATCGACTATACCTACGGCTAACTTCTTTTGGTCACGTATTTCGGACGATGAGAGTGGAGACTTACAGTGGAATAAAGACCACGTAGGTATAGGAAGCTCGTTTAAGATTTCGAAAGATGACGTACCACAGAGAGCAACGTTTGAATGTGATGTAGAGGTACCTGTTAGCTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
fd529a9d1c86837138ac1b1cbaa542d80c8209b21ff82f077f8a0845caf1a193
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50