Protein

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Genbank accession
UKL14693.1 [GenBank]
Protein name
putative tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,67
Protein sequence
MSLVSQPIKNLKGGISQQPDILRFPNQGERQVNGWSSESQGLQKRPPTVFLKRLIGRGGFGPAPLVHLVNRDALEQYYMIFTGTGLFVYDLAGNQYTVRGYDNYANTLKPRESIRLLTVADYTFVVNREKVIDINSTITHPGYNLKNRALVGVRGGQYGRTITVNVEGVAIGSVALPSGVGTEAEIKPMPAQLDAQDICTKLTAAINAGTATHGVTATAGPSYVLLTKAAGFTTVTTQDGYAGQLATSCIASVQTIAKLPNSAPDGYLIEITGETNRSGDNYWVIWDQKGGVWKETVKPGIIDGLNAATMPRALVRAEDGQFDWKVLEWVGRKAGDDTTNPMPSLVDRTINDVFFFRNRLGFLAGENVIMSRTAKYFQLFPASVSATADDDPIDVAVSHSRISILKYAVPFSEQLLLWSDQAQFVLTSSGIFTAKSAELSLTTEFDVQDTARPFGIGRGVYFSAPRASFTSIKRYYAVQDVSNVKSAEDISSHVPSYVANKVHSIQGSGTENFVSILSDGAPALTYIYKFLYIDEQIAQQSWSHWEFGKGANVLASSSIGSYMYMLIERDEGVLLERIEFTQYTKDLPVEPYRTYIDGKVLRQITLYDEDANESYFPVNEIYGGIPDMQTEFWTVDGAGSAVLHKAPKGGWGADPRLKLVGDRRGEQLVIGRVYEFDYEFSKFLLKKQADDGSTATEDVGRLQLRKVWINYERSGAFNIYVNNGSSEYQYEMSGGRLGGEIVLGELSLGTGQYRFSVTGNALNQRVTIKSSNPQPLNIIGCGFDGNYVRRSQAI
Physico‐chemical
properties
protein length:794 AA
molecular weight: 87297,28810 Da
isoelectric point:5,81954
aromaticity:0,10453
hydropathy:-0,22481

Domains

Domains [InterPro]
IPR058003
TTP
1–794
IPR058003
UKL14693.1
1 794
Architecture
TTP
TTP 1-794
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UKL14693.1
1 794
Domain Start End Length (AA) Confidence
N-terminal 1 139 139 0,9938
Central domain 140 349 211 0,2641
C-terminal 350 794 444 0,1756
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-139
Central
140-349
C-terminal
350-794

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Pf17397_F_PD1
[NCBI] 		2914026 No lineage information
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UKL14693.1 [NCBI]
Genbank nucleotide accession
OM131411 [NCBI]
CDS location
range 12764 -> 15148
strand -
CDS
ATGAGTCTCGTAAGTCAGCCCATTAAGAACCTCAAAGGCGGCATTAGCCAGCAGCCTGACATCCTACGGTTTCCCAACCAGGGTGAGCGACAAGTAAACGGCTGGTCGAGCGAGTCCCAAGGTCTCCAGAAGCGTCCACCTACCGTGTTCCTAAAGCGCCTCATTGGCCGTGGCGGGTTCGGTCCGGCTCCTTTGGTGCACCTCGTAAACCGGGATGCCCTCGAACAGTATTACATGATCTTCACGGGGACCGGCTTGTTCGTCTATGACCTTGCTGGGAACCAGTACACCGTGCGTGGCTATGACAACTACGCCAACACCCTGAAGCCTCGTGAGTCCATTCGACTCCTGACCGTGGCCGACTACACCTTTGTGGTCAACCGTGAGAAGGTCATCGACATCAACTCGACGATCACACACCCAGGCTACAACTTGAAGAACCGTGCGCTGGTGGGTGTCCGTGGTGGTCAATACGGTCGGACCATTACGGTCAACGTAGAGGGCGTGGCGATTGGCTCCGTGGCCTTGCCGAGTGGTGTGGGTACTGAGGCTGAGATCAAGCCTATGCCTGCACAGTTGGACGCCCAGGACATCTGCACCAAGCTCACTGCTGCGATCAACGCTGGCACCGCTACCCATGGAGTAACAGCCACTGCTGGACCCTCTTACGTCCTCCTTACGAAAGCTGCTGGTTTCACCACAGTGACGACCCAGGATGGCTACGCAGGACAGTTGGCTACCTCGTGCATTGCGTCCGTGCAGACCATCGCCAAGTTGCCCAACAGTGCCCCTGATGGATACCTGATCGAGATCACCGGTGAGACCAATCGCTCTGGCGATAACTACTGGGTCATCTGGGACCAGAAGGGCGGCGTATGGAAGGAGACGGTCAAGCCTGGGATCATCGACGGCCTGAACGCTGCCACTATGCCCCGTGCGTTGGTGCGTGCTGAGGACGGACAGTTTGACTGGAAGGTTCTCGAATGGGTTGGCCGTAAGGCTGGCGACGACACAACGAACCCGATGCCTTCCCTTGTGGATCGCACGATCAATGATGTGTTCTTCTTCAGGAACCGTTTGGGCTTCCTTGCAGGCGAGAACGTGATCATGAGCCGGACTGCCAAATACTTCCAACTGTTCCCGGCCAGTGTCTCTGCGACCGCTGACGATGACCCGATTGACGTGGCGGTGTCCCATAGCCGCATCTCGATCCTGAAGTACGCCGTACCGTTCTCTGAACAGCTTCTCCTGTGGAGCGATCAGGCCCAGTTCGTGTTGACCTCTTCGGGTATCTTCACGGCCAAGTCTGCTGAGCTTTCGTTGACCACTGAGTTCGACGTACAGGACACAGCCCGTCCTTTCGGTATTGGCCGTGGGGTCTACTTCAGTGCACCTCGTGCGTCCTTTACGTCGATCAAGCGGTACTATGCGGTGCAGGATGTGAGCAACGTGAAGAGCGCTGAGGACATCTCGTCCCACGTTCCAAGCTATGTGGCGAACAAGGTTCACTCCATCCAGGGTTCCGGTACGGAGAACTTCGTGTCGATCCTGTCTGACGGTGCGCCAGCGCTGACCTACATCTACAAATTCCTGTACATCGACGAACAGATCGCGCAGCAGTCTTGGAGTCACTGGGAGTTCGGTAAGGGCGCCAATGTCCTCGCCTCGTCTTCCATCGGGTCCTACATGTACATGCTCATTGAGCGTGACGAAGGGGTCCTTCTGGAGCGTATCGAGTTCACCCAGTACACCAAGGACCTTCCTGTGGAGCCTTACCGGACCTACATCGACGGCAAGGTGCTGCGCCAGATCACACTGTATGACGAGGACGCCAACGAATCCTACTTCCCTGTGAACGAGATTTATGGTGGCATCCCTGACATGCAGACTGAGTTCTGGACGGTGGACGGTGCTGGATCTGCTGTACTCCACAAGGCCCCGAAAGGAGGCTGGGGTGCAGACCCTCGACTCAAGCTGGTAGGTGATCGTCGCGGCGAGCAACTGGTGATCGGTCGGGTCTATGAGTTCGACTATGAGTTCTCGAAGTTCTTGCTCAAGAAGCAGGCCGACGATGGCTCTACAGCGACCGAGGACGTGGGCCGACTCCAGCTCCGCAAGGTCTGGATCAACTATGAGCGCTCTGGTGCTTTCAACATCTACGTGAACAACGGGTCCTCGGAGTATCAATACGAGATGTCCGGTGGGCGTCTGGGCGGAGAGATCGTCCTGGGTGAGCTTAGCTTGGGCACAGGTCAGTACCGGTTCTCCGTGACTGGCAACGCCTTGAACCAGAGAGTCACCATCAAGTCGTCCAATCCGCAACCCTTGAACATCATCGGGTGTGGCTTCGATGGCAACTACGTGCGCCGTTCCCAGGCCATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
25ae841ec4e269eec467c67b476d92744a7ec0cca889d3ef8452fa012215d3bd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3186
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50