Protein

View in Explore
Genbank accession
AYR02252.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,59
Protein sequence
MPVIHVQKMPGTPKETGIVPAGTNLWKWLNKSNLPASISIAVNGRVLGEDDELSFCLRDGDVVNVYCQPSGAIGDLIGAILKPVTKIFSFLTPKVSTPKTDTSSKTSPNTSLKAQTNIARNGEARPDNFGQIRAFPDLLQESLFEYINNIKYVTEFMNFGLGKYDVSSVRYSESNLGSLAGASYTIYQPGEVIPVVYEPYAFDDVDGQELYGPNELDTDPPPVVIETATTTTVTETEFAGGQIAVKIPKNSAFDYFVDLTMPHDVVFKLNITYAQGGGASVTENVTLSGRLVSATETDDGGLPPVNYWYTFIINSINYSGAPISSLNGVTINNTYFNLTDNQPIVSGPYFSPIDGDQLWVHLQHQTNDGNDFSVFIEWWKIDDDNVQIPGTYQSMNYYQDVDRNDTFYYTIKLTPSAGTGRYAIQMRRTNNSSDTSILQLEEIHSIVTRTNVSYPDDTVVKVVVRATENATGSRDRKYNALITRHTIGYNRDTGTVRYTLAPSRSFADAVLHNWLITAGNPENTIDIVKLYEIADSLPDERLGYFDYTFDDEDKSIGERLQTICDAARVTAFWDDGVMSFSRDEKREYPATVFNTRNTQSDGYKLSYDISLPGTYDGVNVEYRDPTTNKQANIYYRITDSGIVECEPTKAKKFDMLYVRNRHQAVDRAILECRRLIYSRRSMEIKALADGEWVNVGDMIQVVDMYDDVQQTGVIEARNGNVFTTSEQLTADDNLYVVITSSDGSVSDRLPATVTGLHTFTCNLPSDFELNIWDGTNVQSESRYVLSTEKELDTTLWVVSQKNPGSDGTTTLTMSEYSDDMYEYNITSS
Physico‐chemical
properties
protein length:828 AA
molecular weight: 92405,46130 Da
isoelectric point:4,54879
aromaticity:0,10266
hydropathy:-0,39324

Domains

Domains [InterPro]
DC_0118
STR
1–672
DC_0118 DC_0808
NF040662
Unmapped
356–822
NF040662
AYR02252.1
1 828
Architecture
STR
RBD
STR 1-672 | RBD 686-827 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage C1
[NCBI] 		2340716 Uroviricota > Caudoviricetes > Deseoctovirus >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYR02252.1 [NCBI]
Genbank nucleotide accession
MH717097 [NCBI]
CDS location
range 3226 -> 5712
strand -
CDS
ATGCCAGTAATTCATGTTCAGAAGATGCCGGGCACACCGAAAGAAACGGGGATTGTGCCAGCTGGTACTAACCTGTGGAAGTGGCTGAATAAATCCAACCTACCAGCCAGCATTTCGATTGCGGTAAATGGCAGAGTGCTTGGTGAAGATGATGAGCTTTCTTTCTGCCTGCGAGATGGCGATGTGGTCAACGTTTATTGCCAGCCATCCGGCGCAATCGGCGACCTTATCGGTGCGATACTGAAGCCAGTAACGAAGATTTTCTCCTTCCTTACGCCGAAGGTATCCACACCAAAAACGGATACCAGCTCAAAAACATCACCAAACACCAGCCTGAAAGCGCAAACCAATATTGCGCGCAACGGTGAGGCGCGACCTGATAACTTCGGGCAGATTCGCGCGTTTCCTGATTTGCTTCAGGAATCATTGTTTGAATACATCAATAATATTAAATATGTCACCGAGTTCATGAACTTTGGCCTCGGTAAGTATGATGTATCTTCCGTGCGTTACTCTGAATCAAACCTCGGCTCACTGGCTGGGGCTAGTTACACCATTTATCAGCCGGGGGAAGTTATTCCTGTTGTGTACGAACCTTACGCATTTGATGATGTTGATGGGCAGGAGCTTTACGGGCCAAATGAACTGGATACCGACCCTCCGCCAGTGGTTATTGAAACGGCAACAACAACCACGGTCACAGAAACAGAATTTGCTGGCGGTCAGATTGCTGTCAAAATACCGAAAAACTCAGCATTCGATTACTTCGTTGATCTGACCATGCCTCATGACGTGGTATTCAAGCTGAATATCACTTATGCGCAAGGAGGTGGCGCATCTGTCACCGAAAACGTTACGCTATCAGGAAGACTCGTATCTGCAACAGAAACTGATGATGGTGGATTGCCACCAGTAAACTACTGGTACACATTTATTATTAACAGCATCAACTACTCAGGTGCACCAATATCATCACTGAATGGCGTGACGATTAATAACACCTATTTCAATCTGACAGATAACCAGCCGATTGTTTCCGGTCCGTACTTTTCACCGATTGATGGTGATCAGCTTTGGGTGCACCTGCAACACCAGACCAATGACGGTAATGATTTCAGCGTATTCATTGAGTGGTGGAAGATTGATGACGATAACGTTCAGATTCCCGGAACATATCAGTCGATGAACTATTATCAGGATGTGGACAGAAACGACACGTTCTACTACACAATAAAGTTAACACCATCCGCTGGAACTGGTCGCTACGCGATTCAGATGCGACGAACAAACAACAGCTCCGACACATCAATTCTTCAGCTTGAGGAGATTCACTCAATAGTCACGCGAACCAACGTCTCGTATCCAGATGATACGGTGGTTAAAGTGGTTGTGAGAGCCACAGAAAATGCAACAGGAAGCCGAGACAGGAAATATAATGCATTAATCACGCGCCATACCATCGGATACAACCGCGATACTGGCACGGTCCGCTACACGCTTGCACCATCTCGTAGCTTTGCTGATGCTGTTCTGCATAACTGGTTGATTACCGCTGGCAATCCAGAAAACACGATCGACATCGTGAAGCTGTATGAAATTGCCGATAGCCTGCCTGATGAGCGACTTGGTTATTTCGATTACACGTTTGACGATGAGGATAAGAGCATCGGCGAGCGTCTGCAAACAATATGCGACGCAGCACGAGTCACTGCATTCTGGGATGATGGGGTAATGAGCTTCTCTCGCGATGAAAAGCGAGAATATCCAGCTACTGTATTCAACACCAGAAACACGCAGAGCGACGGGTACAAGCTGAGCTATGACATCAGTCTTCCCGGCACTTATGATGGCGTTAACGTAGAATATCGCGACCCAACAACGAACAAGCAGGCCAACATTTACTATCGAATTACCGACAGCGGAATTGTAGAATGCGAGCCAACTAAAGCGAAGAAATTCGACATGCTTTATGTTCGCAATCGCCATCAGGCTGTTGATCGTGCAATCCTTGAGTGTCGCCGTTTGATTTATTCTCGCCGCAGCATGGAAATTAAAGCACTGGCAGACGGAGAATGGGTTAACGTTGGCGACATGATTCAGGTTGTTGATATGTATGATGATGTGCAGCAGACTGGCGTTATTGAAGCGAGAAACGGAAACGTATTCACGACCAGCGAGCAGCTAACGGCTGATGATAATCTTTATGTTGTAATAACCAGCTCCGACGGCAGCGTGTCAGACAGATTGCCAGCGACGGTAACAGGATTGCATACATTCACTTGCAACCTTCCGTCTGATTTCGAGTTGAATATTTGGGATGGCACTAATGTGCAATCTGAATCCCGTTACGTTCTGAGCACGGAGAAAGAACTGGATACCACTTTGTGGGTTGTAAGCCAGAAGAATCCGGGAAGTGATGGAACAACAACGCTGACAATGAGTGAGTACAGCGACGACATGTACGAATATAACATCACGTCATCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e87f723addb9df4049e6c2146d0a37338b659b37b0612ba7a062febdb53e3a52
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2894
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Distribution characteristics of Escherichia coli phages in piglets intestinal isolated from Jiangsu and Anhui province Lin,Y., Zhou,B., Luo,J., Hua,J. and Zhang,M. 2014-08-20 — GenBank