Protein

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Genbank accession
XPN73296.1 [GenBank]
Protein name
DNA packaging protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MRLLSTYWSPPSRTTTHPTASGRKLNHKENHMLDRLNQPKGSTIGVLKDGRTIQEAIDDLYVFKDSQGFINVDVQTGATLEEKLRNSFTIANTLLVGVRLTAGKVYPLTGTTPLEVNLAKFSLFTSGGRATIDASEFTGPTALWIHATGSYPTPMYRNTTNYMESIELVGGLKAGVDGWTWGNRGMTTGTEYNGQCIIRGCSVYKFDNCIKCTDSSWRYKVSDCMISTGITSVFNAPAGLIDSGESITFSDTQFSDSNGAKFIIACANFSVGMSGTSVLNTPVVISGNGASLLIDGMGNNENPGKSSWMRYVEVTGIGARFILQSSTLVCNGPSSQTRPLVLVGAKARAIFIAVKFPGNLYMFHVNNPEKVRTFCEGEGIVKTIACTYDIESGAGNIPVHRSLNRFYNNGFEQDLAGWALNVGGDPAQTATIVTDDTNSGGKAVKVASLDGKSVFLTQNVRVSSGEEFASFVAYKVNKAASGSTPGNLTVTFKSENGTTIGTGSTSNFSNTVGAWQQGGLFCRGVAPVGAVSAEISLRVRDGAEVILDDVIVNFL
Physico‐chemical
properties
protein length:555 AA
molecular weight: 59232,12070 Da
isoelectric point:7,50942
aromaticity:0,08649
hydropathy:-0,08432

Domains

Domains [InterPro]
DC_1636
ATT
32–92
DC_1636 G3DSA:2.60.120.260
DC_0903
STR
75–549
DC_0903
IPR008979
STR
405–554
IPR008979
XPN73296.1
1 555
Architecture
ATT
STR
ATT 32-92 | STR 93-554 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPN73296.1
1 555
Domain Start End Length (AA) Confidence
N-terminal 1 79 79 0,9784
Central domain 80 401 323 0,9925
C-terminal 402 555 153 0,9960
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-79
Central
80-401
C-terminal
402-555

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage HJK2
[NCBI] 		3395268 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPN73296.1 [NCBI]
Genbank nucleotide accession
PQ858442 [NCBI]
CDS location
range 38002 -> 39669
strand +
CDS
ATGCGTCTACTTTCAACCTACTGGTCTCCACCAAGTCGGACAACAACGCATCCTACCGCTTCAGGGCGAAAGTTAAACCATAAGGAGAACCACATGTTAGACAGACTGAATCAGCCGAAAGGCTCAACCATTGGTGTGCTCAAGGATGGGCGCACTATCCAAGAGGCTATTGACGACTTGTATGTGTTTAAGGATTCTCAAGGATTCATAAACGTGGACGTGCAGACTGGTGCCACCCTTGAGGAGAAGCTGCGCAATTCCTTTACGATAGCCAATACGCTACTTGTGGGCGTACGCCTGACGGCTGGTAAGGTATACCCGCTGACTGGCACAACCCCTCTTGAGGTTAACCTAGCGAAGTTCTCACTGTTCACTTCAGGTGGCCGCGCTACAATCGACGCCTCAGAGTTCACTGGCCCTACTGCATTGTGGATTCACGCCACTGGCTCCTATCCGACCCCAATGTATCGAAACACGACCAACTACATGGAGTCCATCGAGCTTGTGGGTGGGCTTAAGGCTGGCGTCGATGGGTGGACTTGGGGTAACCGTGGGATGACCACCGGAACCGAGTACAACGGTCAGTGTATAATCCGTGGGTGCAGCGTCTACAAGTTCGACAACTGCATCAAATGTACTGACTCGTCTTGGCGCTACAAGGTATCTGACTGCATGATTTCTACCGGAATCACCTCTGTGTTCAACGCCCCTGCTGGACTGATTGACTCCGGCGAGTCCATAACCTTCAGCGACACTCAGTTCTCCGACTCGAACGGGGCTAAGTTCATCATTGCGTGTGCAAACTTCAGTGTAGGCATGTCCGGCACAAGTGTGCTCAATACCCCGGTTGTTATCTCTGGGAATGGTGCTTCACTACTCATCGACGGCATGGGGAACAACGAGAACCCCGGTAAAAGTTCTTGGATGCGCTACGTCGAGGTGACTGGAATCGGAGCACGCTTCATCCTACAGTCCTCAACGCTCGTGTGTAACGGCCCATCTTCTCAGACCAGACCGCTTGTGCTTGTTGGGGCGAAAGCTCGCGCAATCTTCATTGCCGTCAAGTTCCCCGGTAACCTCTATATGTTCCATGTGAATAACCCAGAGAAGGTGCGAACATTCTGTGAAGGCGAGGGTATCGTTAAGACAATCGCGTGTACATACGACATTGAATCGGGGGCTGGTAACATTCCAGTCCACCGCTCACTTAACCGATTCTACAATAACGGGTTCGAGCAGGACTTGGCTGGATGGGCGCTTAACGTTGGTGGCGACCCAGCACAGACGGCTACAATTGTCACGGATGATACCAACAGCGGCGGTAAGGCGGTTAAGGTTGCCTCTCTGGATGGTAAGAGTGTGTTCCTTACCCAGAATGTCAGAGTGTCTTCTGGAGAGGAGTTTGCATCGTTCGTGGCCTACAAGGTCAATAAGGCGGCATCCGGCTCAACACCGGGTAACCTGACAGTAACCTTTAAGTCCGAGAATGGTACCACTATCGGTACAGGCTCGACGTCTAACTTCTCGAACACTGTCGGGGCGTGGCAGCAAGGTGGCCTGTTCTGCCGAGGCGTTGCCCCAGTAGGTGCTGTATCCGCTGAGATATCTCTCCGTGTTCGTGATGGTGCTGAGGTTATCCTTGATGACGTTATCGTAAACTTCTTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3be723b93e6c156ecec4a0bb6abcc6362da4c96e62386b243f38351396e69efd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8138
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50