Protein

View in Explore
UniProt accession
A0A2D0Z9J2 [UniProt]
Protein name
Tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,53
TF
Evidence RBPdetect2
Probability 0,78
Protein sequence
MTITLSEVRGGFNTSTINSNFEKIEEALNSNVLSVKEGSNQMEQDLDMNSNRLINLPAPINPTEPLRLEDLKTLEGDVSGIVPTVIRHTGDGVTFDFDSGTKVVAGPFSTKVYLNGIRLFPEVDYTTIGTKVRFINYVPTSTDKVDIYSYAPLEVIGPVGPTGPQGQEGERGPSPQYEWEGTRIRFIQPDGTWGPYVDLVGEIGPVGPQGPQGNVGPQGDSVAIDAIGNFADRSTYDNSPAKFVFFAKDYVFGVTQAGELEVVSDGVTSQYTLPFEAAGPAEIVLYYGNSYQRIATYSVTNLTNLVLFNVPEAGVRIVARRQVVPNSVGALFIKLSNTSGDWSQPYPFGQGPQGIEGPQGPIGPVGPQGPRGPEGPQGQPGQTGPQGPTGPQGPEGPRGPMGPQGPEGDKGPQGDQGQRGSREWYIETTGTSWSQALIDAINPNPVIYDVGIQYNKSQGYSESRVYRGSGVWEQVELVQGFTIKVMNGVSATKLNIGSATVLSSTTFGGTDTPLNQARSFSVRLGVISTPFATSAMVSLEDLQVLLYAFSPSFQPTVQMTWSIRVNGSVVYESSRRAFVTADNTTYYGFSGGTWAFTIPSPREGNTIEVFLNGYVTSPGTNFKLSRVTTTGSQFSVVSLKA
Physico‐chemical
properties
protein length:641 AA
molecular weight: 68652,58450 Da
isoelectric point:4,73755
aromaticity:0,09672
hydropathy:-0,29984

Domains

Domains [InterPro]
DC_1894
ATT
3–160
DC_1894 DC_1279 DC_0898
DC_2298
STR
125–260
DC_2298 IPR008160
IPR050149
Unmapped
159–421
IPR050149
A0A2D0Z9J2
1 641
Architecture
ATT
STR
RBD
ATT 3-160 | STR 161-419 | RBD 422-641
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A2D0Z9J2
1 641
Domain Start End Length (AA) Confidence
N-terminal 1 490 490 0,9974
Central domain 491 630 141 0,0156
C-terminal 631 641 10 0,9949
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-490
Central
491-630
C-terminal
631-641

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage JSF27
[NCBI] 		1983605 Uroviricota > Caudoviricetes > Zobellviridae > Icepovirus bengalense >
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASV43818.1 [NCBI]
Genbank nucleotide accession
KY883658 [NCBI]
CDS location
range 24523 -> 26448
strand -
CDS
ATGACTATTACTCTTAGTGAAGTAAGAGGAGGCTTTAACACCTCCACAATCAACTCCAACTTTGAGAAGATTGAAGAAGCTCTAAACTCCAATGTTCTCTCGGTTAAGGAAGGTTCCAATCAAATGGAACAAGATTTGGATATGAACTCCAACCGTCTAATTAACCTACCTGCTCCAATCAACCCTACCGAACCTCTTCGACTGGAAGACCTTAAAACCTTAGAAGGTGACGTGTCTGGTATTGTTCCAACGGTGATTCGACACACTGGTGATGGAGTTACTTTTGACTTCGACAGTGGTACTAAGGTAGTTGCAGGTCCTTTCTCTACCAAAGTGTATCTAAACGGTATCCGTCTGTTTCCAGAAGTGGATTACACTACAATAGGCACAAAGGTACGGTTCATTAACTACGTTCCAACATCCACAGATAAGGTGGACATTTATTCGTATGCTCCACTTGAAGTAATAGGTCCGGTGGGTCCAACTGGCCCGCAAGGACAAGAGGGTGAGCGTGGCCCTTCTCCACAATATGAATGGGAAGGCACTCGTATTAGATTTATCCAACCAGACGGTACATGGGGTCCTTACGTAGACCTAGTGGGGGAGATTGGTCCTGTTGGCCCACAAGGTCCTCAAGGTAACGTTGGTCCTCAAGGTGACTCTGTTGCTATTGATGCTATTGGTAATTTTGCAGACCGTTCAACCTACGACAACTCCCCAGCTAAGTTTGTATTCTTTGCCAAAGATTATGTATTTGGTGTAACACAAGCAGGGGAATTGGAAGTAGTAAGTGATGGTGTAACCAGTCAATACACTCTACCTTTTGAGGCCGCTGGCCCTGCTGAGATTGTGTTGTACTATGGTAACTCTTACCAACGTATTGCTACTTACTCAGTAACTAACTTAACTAACCTAGTGTTATTTAATGTTCCAGAAGCTGGTGTTCGTATTGTTGCCCGTCGGCAAGTAGTTCCAAACTCTGTAGGTGCTTTGTTTATTAAATTGAGTAATACTAGTGGAGATTGGTCACAACCTTACCCATTCGGCCAAGGTCCACAGGGTATCGAGGGCCCACAAGGTCCAATCGGACCAGTAGGCCCCCAAGGGCCACGAGGACCAGAAGGTCCCCAAGGACAACCGGGTCAAACAGGTCCACAAGGCCCTACTGGGCCACAAGGTCCAGAAGGCCCGCGAGGTCCAATGGGACCACAGGGTCCAGAGGGAGATAAGGGTCCACAAGGGGACCAAGGTCAACGTGGTTCTCGTGAGTGGTACATCGAAACAACAGGCACAAGTTGGAGCCAAGCGTTGATTGACGCTATTAACCCTAATCCAGTTATCTATGATGTTGGTATCCAGTATAACAAATCACAGGGGTATTCTGAGTCCAGAGTGTACCGTGGTTCTGGAGTATGGGAACAGGTAGAGTTGGTTCAGGGATTCACAATCAAGGTGATGAATGGTGTAAGTGCTACCAAGTTAAATATTGGGTCAGCCACTGTATTATCCAGTACTACATTTGGTGGAACAGATACTCCACTTAACCAAGCACGGTCATTCAGTGTTCGTCTAGGAGTGATTAGTACCCCGTTTGCGACTTCTGCAATGGTTAGTTTGGAAGATTTACAGGTTCTGTTGTATGCATTTAGCCCCTCATTCCAGCCTACTGTTCAAATGACTTGGAGTATTCGAGTAAATGGTTCCGTAGTGTATGAGTCTTCTAGACGTGCTTTTGTTACCGCAGATAACACAACTTATTATGGTTTTTCTGGAGGAACTTGGGCATTTACTATTCCTTCTCCTAGAGAGGGAAACACTATAGAAGTTTTCCTAAATGGGTATGTAACTTCTCCGGGAACTAACTTTAAGTTAAGCAGAGTAACTACAACTGGCTCCCAATTTAGTGTAGTATCTTTGAAAGCATAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)
GO:0030020 extracellular matrix structural constituent conferring tensile strength Molecular Function IEA:TreeGrafter (UniProt)
GO:0030198 extracellular matrix organization Biological Process IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
a8b1269c76d6cc0f7e4fbc0c985c341f4faeb7360715e9611c272fe1f407363b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6416
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50