Protein

View in Explore
Genbank accession
UJD04931.1 [GenBank]
Protein name
tailspike protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,72
Protein sequence
MANKPTKPNFPLGLESQDQSVFQEGILNNGVVEHGPDAVMTVPETPDASGVPSAVRYNEDDDQFEGYYNEGGWLPLGGGNGGRWELLPYASSSLLQAGRAYLVDNTDGVSTVLFPSPKRIGDSVTVCDLYGKFSTYPLTVDGNGKSIYGSADSMTISTDNVSATFTWTGEARGWVITSGVGLGQGRVYSREIYSQILSASTPSIILSTQPSIVDVYVDGKRLKESLYTLDGYEVKFDPALASGSDVQIIQYIPIQLGAGGGGSGGTVITWEYNGGSAIGGETQIVLDVVVDSVSEIYIRGSRQQIGRGFTFDPATSTITLADELEAGDDVVVVINGDPTVYNQIDRTPWEVARANNVSNSEVILSTDKTSVLDGKTIIYDVLEQKAWGIPSGIPSGAKISNVSSGVLIYTPGNVSKNLIELMCKKNIRELWRRTLIEFGVNLVAGSFEEGAVLNNSNDAIWYFSGGQCYFYSGDFPKVIEPNSYPGEGFSVVQTQDDLDIGGEGSSLFDRLTQRGQYDLHQGFADPRGIAGITFGGKNNKGTITVDQRGRLQVYSVKDGVLTASRVAIPFTEGYGYGSNSKLGTITRFPVAGAEDDSQNSSLILLPQDDGSVKGYLAGPGLYTAYAVPESNAVKSLGKEIATIDQLPEALIFSSSNPTTWLSTSSWVKLVTVNNSQQGAVFSGLYSAGGGLSEAVGTYLIEMFSPSTNITTINSANLKTFVRITALRSRGDFRYPSGLCSFGIVVDSTAGTTTLYAKLSNRSENSTLVPLRTTPDSSTGVFRVKIWNDKDSYVTVEPSGIIYTQIAESLTSNTTVTLNDGSCATTRGAVVRIANSMSSVTKSTIVGSEFQSNDTYSAINRGYAGLGTVTVTKPSTGKYVITGAKTPDNAEWKIRSPRTAFGGGLQTLVATIESEVGNVITIGVRSVNYTANTTTGAVTVALGDYTDIPNDSWVDVHTNLN
Physico‐chemical
properties
protein length:960 AA
molecular weight: 102182,42810 Da
isoelectric point:4,68282
aromaticity:0,08750
hydropathy:-0,14677

Domains

Domains [InterPro]
DC_1946
ATT
1–729
DC_1946
G3DSA:3.30.2020.50
ATT
341–424
G3DSA:3.30.2020.50 G3DSA:2.10.10.80
UJD04931.1
1 960
Architecture
ATT
ATT 1-729 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UJD04931.1
1 960
Domain Start End Length (AA) Confidence
N-terminal 1 669 669 0,9815
Central domain 670 868 200 0,4684
C-terminal 869 960 91 0,9963
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-669
Central
670-868
C-terminal
869-960

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage PWKp5
[NCBI] 		2863273 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJD04931.1 [NCBI]
Genbank nucleotide accession
MZ634341 [NCBI]
CDS location
range 133963 -> 136845
strand +
CDS
ATGGCTAATAAACCCACGAAACCAAATTTTCCGCTTGGGCTTGAATCACAAGATCAATCCGTATTTCAAGAAGGTATTCTGAATAATGGTGTTGTAGAACATGGCCCAGATGCGGTAATGACTGTGCCAGAAACTCCTGACGCATCTGGGGTTCCTTCTGCTGTCCGTTATAACGAAGACGACGATCAATTCGAAGGCTACTACAACGAAGGCGGCTGGTTGCCGCTTGGTGGCGGTAACGGTGGGCGCTGGGAACTCCTTCCGTATGCCTCCTCTTCCCTGTTACAAGCAGGACGTGCATATCTGGTAGATAATACGGACGGCGTCTCTACGGTGCTGTTCCCTTCCCCTAAACGTATTGGTGACAGTGTTACTGTCTGTGACCTTTATGGTAAATTTTCCACTTATCCTCTGACTGTTGACGGAAACGGTAAATCGATCTATGGTTCTGCTGATAGCATGACGATTTCTACCGATAATGTCAGTGCGACGTTTACGTGGACTGGTGAAGCCCGTGGTTGGGTGATAACTTCTGGTGTGGGCCTGGGGCAAGGCCGGGTTTATAGTCGCGAAATCTACAGCCAAATTCTGTCAGCGTCAACACCATCTATCATCCTGAGCACTCAACCATCTATTGTAGATGTGTACGTTGACGGAAAACGTTTGAAAGAATCCCTGTATACTCTCGACGGGTATGAAGTCAAATTCGATCCGGCGTTGGCCTCTGGTTCTGATGTGCAGATTATTCAGTACATTCCAATTCAGCTCGGCGCGGGCGGCGGGGGTTCTGGTGGCACTGTAATCACCTGGGAATACAACGGCGGTTCAGCTATCGGCGGCGAAACCCAAATCGTTCTGGACGTGGTCGTTGACTCAGTATCTGAGATCTACATCCGTGGATCCCGTCAACAGATAGGGCGTGGGTTCACATTTGATCCTGCCACCAGTACGATTACTCTGGCGGATGAACTGGAAGCTGGGGATGACGTTGTCGTCGTTATCAACGGTGACCCAACGGTCTATAACCAGATCGACCGTACTCCTTGGGAAGTCGCCCGCGCGAATAACGTAAGCAATTCCGAAGTTATTCTCAGCACAGACAAAACTTCTGTTCTAGATGGGAAAACTATAATCTATGATGTTTTGGAACAAAAGGCTTGGGGTATTCCTTCTGGTATTCCTTCTGGTGCAAAAATATCTAACGTGTCTTCAGGTGTTTTGATTTATACACCAGGTAACGTTAGTAAGAACCTCATAGAATTGATGTGTAAGAAAAATATAAGAGAACTTTGGAGAAGGACATTAATTGAATTCGGGGTTAATCTCGTAGCTGGTAGTTTTGAAGAAGGGGCCGTCCTGAATAACAGTAATGATGCTATCTGGTATTTTTCAGGTGGGCAATGCTATTTTTATTCTGGGGATTTTCCTAAAGTAATTGAGCCTAATAGTTACCCCGGTGAAGGGTTTTCTGTCGTACAAACTCAAGATGATCTTGACATAGGTGGTGAAGGGAGTTCGTTGTTTGACAGATTGACACAGAGAGGTCAATATGATCTACATCAAGGGTTTGCTGATCCAAGAGGGATAGCCGGTATAACGTTTGGTGGGAAAAATAATAAAGGCACCATCACGGTTGACCAAAGGGGTAGATTGCAAGTATATTCAGTTAAAGACGGAGTATTAACCGCTTCCAGGGTTGCCATACCATTCACGGAAGGTTATGGTTACGGAAGCAACTCTAAACTGGGGACAATTACCCGTTTTCCAGTAGCAGGCGCTGAAGATGATAGCCAAAATTCCAGCTTGATATTGTTACCCCAAGATGATGGTTCAGTCAAAGGGTATCTGGCTGGTCCTGGATTATATACCGCCTATGCAGTACCAGAATCCAACGCTGTCAAATCATTAGGCAAAGAGATTGCAACGATTGATCAGCTACCAGAGGCGTTGATTTTCTCCTCATCCAACCCTACAACTTGGTTAAGCACTTCGTCGTGGGTAAAATTGGTGACGGTAAATAACTCCCAGCAAGGAGCCGTATTCAGTGGCCTCTATTCAGCAGGGGGTGGGTTATCAGAGGCTGTAGGAACTTATCTTATCGAGATGTTCTCGCCTAGCACAAACATAACCACAATAAATTCGGCTAATCTGAAAACGTTCGTCCGCATTACTGCATTGCGATCTCGTGGAGACTTTCGTTATCCATCAGGACTGTGTAGCTTTGGTATTGTTGTTGATAGCACCGCTGGTACGACCACACTTTACGCCAAACTGAGTAACCGTTCTGAGAACTCAACATTAGTTCCATTACGGACTACACCGGACAGCTCAACTGGGGTTTTCCGAGTAAAAATTTGGAACGATAAAGATAGTTATGTGACTGTGGAACCGTCTGGAATTATATACACCCAGATTGCTGAATCGCTAACCAGTAATACCACTGTTACTCTGAATGATGGCAGCTGTGCTACAACTCGGGGAGCAGTTGTTCGTATCGCTAACTCAATGAGTTCAGTAACGAAGTCCACAATTGTCGGAAGTGAATTCCAGAGTAACGATACCTATAGCGCCATAAACCGAGGTTATGCCGGGCTAGGCACAGTAACAGTAACAAAACCTTCGACCGGGAAATATGTGATTACTGGGGCTAAAACTCCAGACAATGCTGAATGGAAGATTCGCAGCCCAAGGACTGCATTCGGAGGTGGGTTACAAACTTTAGTTGCGACCATCGAGAGCGAAGTCGGCAACGTGATCACCATTGGTGTGCGGTCGGTGAACTATACCGCAAATACAACTACCGGAGCGGTCACTGTTGCGCTCGGAGACTACACAGACATACCAAATGATAGTTGGGTAGATGTTCACACTAACCTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f37f3b203db6d0f2aec1ae1ed1f7eeda3ddcb292e23a4259db3e5c11cc5252b3
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3069
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic Bacteriophages against Mutidrug-Resistant Klebsiella pneumoniae: Development of an Effective Phage-based Approach to Combat Multidrug Resistance Martins,W.M.B.S., Cino,J., Lenzi,M.H., Sands,K., Portal,E., Mathias,J., Hansan,B., Dantas,P., Migliavacca,R., Hunter,J.R., Medeiros,E.A., Gales,A.C. and Toleman,M.A. 2021 — GenBank