Protein

View in Explore
Genbank accession
XCD05076.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,76
Protein sequence
MIIYVLDKNFKKIDILRKYTFAQYSNKARDIGTFSIQCQIAEEVLYLLNKEQYYVLFDNSLLGKIEDIHRDSDSEYVKTIEITGRLDKYIFANRVIDGTYKAQNVKSHVFVSNVISKYLSNENERFIDYVLVREDRDRLDAMSLTISKQVTGGYIWDAIQPIMEQSKIFVRMEPQVIPTDTVNGVPTNIEGWNIVISAGVDKTKRNTLGNKPVVFSHSLSNIARTEYRYNVENYKGVAYIAGEDSGNDRKWYSKYVDTSAESETGWNRSELWIDARDIQSENEDGTTITDAEYEELITDRANEKFAENTKTEEYSATVITADKRYVYGTDYNLGDFITIVDNELGLEVDAQIISVIKSVQDTGTIIDVECAYGSLHKNNDVKQTLSSLKAATENNAVNIKYLENKIGSSSGGSGSAASVQTDVYNIALLGAKEGSENQATNKAILDEIVSKHTEEDGIWTEIYIPAGKIYYIGTVYLTHSKIRVTGGGVVCGKFYVRKTENDSYKSYIEFDNITFWFDSLASGNNAISMRLVSRARIVNCRFYNCDKAINCFQTETKQHVSRVIIANNYFYNVNYALIHERGIGTPDLAIADIQFENNMVENALYYHIYLECIDGVIIKGNTFFFPSHTTANTTKKCNIYLYQVDWTIIADNNLFEAGEQAILVKRASHVNIHGNNIAWSGQRAQLPAIQLSNKDNAGGIMSGSTIMGNNIVYPSAEGILVQDTGCVTVIGNTCYECCNDSYYYGTTTFDSSTHDYGIKTDVSESAFVHTIGNNSPRNYNSIVSGATSRSTDITNLSYNTKAYSPNYDEHVTVEITIKQGKKISDVYNLGSIIVAATIIYTDAMYYLPAMVCINNTGNLQLVAQTEASQDYTYSVKVLFRQGK
Physico‐chemical
properties
protein length:883 AA
molecular weight: 99072,66930 Da
isoelectric point:5,14787
aromaticity:0,10532
hydropathy:-0,30951

Domains

Domains [InterPro]
IPR029432
STR
3–365
IPR029432 IPR012334
IPR029432
STR
3–370
IPR029432 IPR012334
IPR011050
STR
463–623
IPR011050 IPR006626 IPR006626
IPR006626
Unmapped
472–493
IPR006626 IPR006626 IPR006626 IPR006626
IPR011050
STR
592–795
IPR011050
XCD05076.1
1 883
Architecture
STR
STR
STR 3-370 | STR 425-795 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCD05076.1
1 883
Domain Start End Length (AA) Confidence
N-terminal 1 437 437 0,7689
Central domain 438 794 358 0,9837
C-terminal 795 883 88 0,9706
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-437
Central
438-794
C-terminal
795-883

Taxonomy

  Name Taxonomy ID Lineage
Phage Dulem virus 36
[NCBI] 		3145754 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCD05076.1 [NCBI]
Genbank nucleotide accession
PP511521 [NCBI]
CDS location
range 21946 -> 24597
strand +
CDS
ATGATAATATATGTATTAGACAAGAATTTTAAAAAGATTGATATTTTGAGAAAATACACATTTGCGCAATATAGCAACAAAGCAAGAGATATTGGTACCTTTAGTATACAGTGCCAGATTGCAGAAGAAGTGTTATATCTGTTAAACAAAGAACAGTACTATGTTTTGTTTGATAATAGTTTGTTAGGCAAAATTGAGGACATACACAGGGATAGCGATTCTGAATATGTAAAAACAATTGAAATTACAGGCAGGTTAGACAAATATATTTTTGCTAATCGTGTAATAGATGGAACGTATAAAGCACAAAATGTTAAGTCACATGTGTTTGTATCAAATGTAATTAGCAAGTATCTGTCGAATGAGAACGAACGTTTTATTGACTATGTTTTAGTAAGAGAAGATAGGGACAGACTTGATGCAATGTCATTGACAATATCAAAACAAGTTACAGGTGGATATATTTGGGATGCCATTCAGCCGATTATGGAACAAAGCAAAATATTTGTTAGAATGGAGCCACAAGTAATACCAACGGACACAGTAAACGGAGTTCCCACAAACATAGAAGGCTGGAATATTGTTATATCGGCAGGAGTGGACAAAACAAAAAGAAATACATTGGGAAATAAACCTGTCGTGTTTTCGCATTCGCTAAGCAATATAGCCAGAACAGAATACAGATATAATGTTGAAAATTATAAAGGTGTTGCATACATAGCAGGGGAAGATTCTGGCAACGATAGAAAATGGTATAGTAAGTATGTAGATACATCAGCAGAAAGCGAAACAGGTTGGAATCGTTCTGAATTGTGGATAGATGCAAGGGACATTCAAAGCGAGAATGAAGACGGAACTACTATAACAGATGCAGAATATGAAGAATTGATAACAGATAGAGCAAATGAAAAGTTTGCAGAGAACACAAAAACAGAAGAATATTCTGCAACTGTTATAACAGCAGATAAAAGGTATGTATACGGCACTGATTACAACTTAGGAGACTTTATTACAATTGTTGATAATGAGTTGGGTCTTGAAGTAGACGCACAAATAATATCAGTTATAAAATCGGTACAAGATACCGGCACAATAATAGATGTAGAATGTGCTTATGGTTCATTGCATAAAAATAACGATGTAAAGCAAACGTTAAGCAGTCTTAAAGCAGCAACAGAAAACAATGCAGTAAACATAAAGTATTTGGAGAATAAAATTGGTAGTTCTTCTGGTGGTAGTGGTTCCGCTGCATCAGTGCAGACCGATGTTTATAATATAGCTTTGCTGGGCGCTAAAGAAGGCAGCGAAAATCAGGCTACCAACAAAGCGATATTGGATGAAATTGTAAGTAAGCATACAGAAGAAGACGGTATCTGGACAGAAATATACATACCAGCAGGTAAGATATACTACATTGGTACTGTGTATCTAACACATTCCAAAATTAGGGTAACAGGCGGAGGAGTTGTATGCGGTAAATTTTATGTTAGAAAGACAGAAAACGATTCGTATAAGTCCTATATAGAGTTTGACAATATTACATTTTGGTTTGATTCGTTGGCTTCTGGCAACAATGCTATATCTATGCGTTTAGTATCGCGAGCGAGAATTGTAAATTGTAGGTTTTACAATTGTGATAAGGCTATAAATTGTTTTCAGACCGAAACAAAGCAGCATGTGTCTAGAGTAATTATAGCAAACAACTATTTTTACAATGTAAATTATGCGCTGATACATGAAAGAGGTATTGGTACACCGGATTTGGCAATAGCCGATATACAGTTTGAAAATAATATGGTTGAGAATGCTTTGTACTATCATATCTATCTGGAATGTATAGATGGAGTAATAATCAAGGGAAATACGTTTTTCTTCCCGTCACACACAACTGCAAACACGACAAAAAAGTGCAACATATATTTGTATCAAGTAGACTGGACAATAATTGCAGACAACAATTTATTTGAAGCAGGAGAACAAGCGATACTTGTTAAAAGGGCATCGCATGTAAATATACATGGTAACAATATCGCATGGTCAGGACAGAGAGCGCAACTTCCGGCTATTCAGTTATCTAACAAAGATAATGCTGGAGGTATAATGTCAGGTAGCACAATAATGGGAAACAATATTGTCTATCCATCAGCCGAGGGAATATTGGTACAAGATACAGGCTGTGTGACTGTAATTGGTAATACATGTTATGAATGTTGTAATGATTCATACTATTACGGTACTACTACTTTTGATTCATCTACGCATGATTATGGAATAAAAACCGATGTATCTGAAAGTGCTTTTGTTCATACGATTGGTAACAATTCACCGCGTAATTACAACAGTATAGTATCTGGTGCTACTTCAAGGTCTACAGATATTACTAATTTAAGTTACAATACGAAAGCTTACAGTCCGAACTATGATGAACACGTGACAGTTGAGATTACAATTAAACAAGGAAAGAAAATAAGCGATGTATACAATTTAGGTAGCATAATTGTAGCAGCAACTATAATATATACAGATGCTATGTATTATCTGCCTGCAATGGTGTGTATAAATAATACTGGTAATTTGCAATTGGTAGCGCAAACAGAAGCAAGCCAAGATTACACGTATTCAGTCAAAGTTCTATTTAGACAAGGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
01ee69ed54e3eea9960bf2358f1ead2bd70f3b3a925035633b02d333815866d0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3011
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse circular DNA viruses in blood, oral, and fecal samples of captive lemurs Paietta,E.N., Kraberger,S., Lund,M.C., Custer,J.M., Vargas,K.M., Ehmke,E.E., Yoder,A.D. and Varsani,A. 2024-07-08 — GenBank