Protein

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Genbank accession
YP_010844737.1 [GenBank]
Protein name
baseplate protein
RBP type
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MAGKSGLDMLLMQYSDSPNLRAYIQIFLDELKLVQDAQEESVKYRYLADSFGVMVDDIAYLIGASRTIYGAAPLGYFGFYSDPSAFPAGDDNNPGVGGVLKSDGDRDSGDFVRTDTQLKDAIRARIRKIVGSCTIEELIVYVDLVLGRNLNLEIVEGFQTLHYQVHNTLSVAEKVLLAYMLPDFKPVGISITLSDNGGTIELPYVSKVYPPEDQ
Physico‐chemical
properties
protein length:214 AA
molecular weight: 23575,47540 Da
isoelectric point:4,49894
aromaticity:0,09813
hydropathy:-0,03832

Domains

Domains [InterPro]
IPR021283
TAS
8–191
IPR021283
YP_010844737.1
1 214
Architecture
TAS
TAS 8-191 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage PYps16N
[NCBI] 		2801354 Uroviricota > Caudoviricetes > Chaseviridae > Carltongylesvirus > Carltongylesvirus PYps16N
Host Yersinia pseudotuberculosis
[NCBI] 		633 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010844737.1 [NCBI]
Genbank nucleotide accession
NC_079179 [NCBI]
CDS location
range 44660 -> 45304
strand +
CDS
ATGGCTGGTAAATCTGGTTTAGATATGCTGCTAATGCAGTATAGCGATTCTCCAAACTTACGGGCATACATCCAGATTTTCCTGGACGAGTTAAAGCTCGTTCAAGATGCTCAAGAAGAGTCTGTTAAATATCGCTACCTTGCTGATTCATTCGGCGTCATGGTTGATGATATTGCATATCTCATTGGTGCCAGCCGTACTATCTATGGTGCAGCACCACTTGGGTACTTCGGCTTCTATTCTGACCCAAGTGCATTCCCTGCTGGAGATGACAATAATCCTGGCGTTGGTGGTGTCTTGAAGTCGGATGGCGACCGAGACTCTGGTGACTTTGTTCGTACCGACACTCAGCTTAAAGACGCGATACGTGCTCGCATTCGTAAGATTGTCGGAAGCTGTACAATCGAAGAACTGATTGTTTATGTGGACCTTGTTCTTGGTCGTAACTTGAATCTTGAAATTGTTGAAGGATTCCAGACACTACACTACCAAGTGCATAACACATTGTCAGTTGCTGAGAAAGTCCTGTTGGCCTACATGCTCCCAGACTTTAAACCTGTTGGTATCTCCATAACTCTTTCGGACAATGGTGGTACTATCGAACTACCATATGTATCTAAAGTTTATCCACCGGAGGACCAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
8d8ec0de6fcb75fc3efa6a2edeaede141c3db39b629de64fadac76dd9889af31
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7931
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome of Yersinia pseudotuberculosis phages Hammerl,J.A. and Hertwig,S. 2018-05-10 — GenBank