Protein

View in Explore
Genbank accession
XYM57341.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MPAINVAKTDTFEIQRQKINDIGTQIFNISAGGSDLATGELKLGDGTKIAPSLAFTSEATLGLYKPNAQEIGFVAAGKDIVNYRSDGVYSFQDLYIRKRTLLNAGLTIQDEGQDYDAGTYSGISVVGGSGSNGLLDLVVEAFNGSITNSGSNYPSGNYSDIPLNSNGSGTGVVVTFGTPDPVIGIGNAGSGYDDNEYGSIAPVSSGNGEGLIVDLTISGGVLTAVEVAEPGTGHLSTDTFTIDNTTLTYIDENSGLEVQSGGSGIQLTITNNCNEVNSETLSFSEKGSGHAPGDLLTTPGSVTKTGNLPGVVTGLATTVSTASTNITVSSTAGIVAGMIVAQTAGDGAIEGSSVVASVVNGTTVQLSELPTVDGTATLDFTSDPINIITFADASDIISGSSISGGGYSGTVGSVDYETNEVQLDPDPTSGGATGVTFTINPPYGSGSGFEYTINQVGVITNTSVSSGGAGNGYAVGDVVSVNPLALTAPLEYSVTVFDGQLLTVASGINVSVGSVINAYTPPDTEAGTPAEYGEDLEVIAITAGTPGNATGFIASAATQLDAGAQFGINSSGVFTVASYDPAGRYYIDDGNGSTLQPNLTLYVGNTYFFNQTDGTYGAHPLTFSQHPDGTHNQVTGVNTTDLVSGSDTFTVDNSAGILVGMIIAKTDDEGTGAVPLGATVTSVVGTTITMSGAATAAGAAELSFTGAIYTDDVTLSSTGPSITITASTPNPLYYFCSVHPNMGGQHTIDANNPKTFGSGFELLISSVDVDDIISGDINSGTFDAVTLTSETSTIGEGTFSTSVTTPSATANTLNASDIIGIGSNNLNISATGNIVFQAPELRYGTGIVFNSTLNQIESSGEIKTTNRFNVNDRLFIQGTNISSTSLDDILLTPGLGRVAKVDTTTAFTIPVGTTNDRPGALAVESGQIRFNTDTNQYEGYSSTAGAWNSLGGVRDLDGNTYILAEEFIGANDNTLYFVNDAVTTLKLDRNFLDFFTTKNIKSTRVGAPANRNWNTNTPVTAGEYLKYGLNLYEVMTSGVTGTSGNEPTDTTGNNFNNGSAVLRYDSLAAAPIDFDEVELVRIGASNPIPLEINGDLKLFNNTISTIVNDMVLAPNPGQKVKVDSNTSFVVPVGDSNSRGNAEQGSIRYNTSDSTYEGYDGTQWGSLGGVKDVDQNTYIIPETAPGANENILYFYNNGLNTLRVTETAMEFQDIDTITSLGAGGAKDLLNINANVVTFDNLATSLQNTDASRSFFFTTKQNFDFGLSSGLTTDTLVRLTDDGDIFFNLGFGTGVYNGLKIINEDLTAVELQKYAVRTDQTALTKDTIDQGATVLYNPTDEASAKVILTAHNKTSGQKEFLEFAVIDNGTDIVYTEYNNLKTGQEIVSVLFDFDANNNVRLTYTLDSGLNPNNAVDVTVVTYVTKR
Physico‐chemical
properties
protein length:1424 AA
molecular weight: 147983,25310 Da
isoelectric point:4,05003
aromaticity:0,07725
hydropathy:-0,08680

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Sf-CH1a
[NCBI] 		3413212 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM57341.1 [NCBI]
Genbank nucleotide accession
PV340849 [NCBI]
CDS location
range 87942 -> 92216
strand +
CDS
ATGCCAGCAATTAACGTCGCCAAAACAGATACCTTTGAGATTCAAAGGCAAAAGATCAACGATATCGGTACGCAGATTTTTAACATCTCTGCAGGTGGTAGCGACCTGGCTACTGGAGAACTGAAACTCGGAGATGGAACTAAGATTGCTCCGTCGCTAGCATTCACAAGCGAGGCAACTCTAGGTCTATACAAACCAAATGCTCAGGAAATTGGTTTTGTTGCTGCTGGTAAGGATATTGTTAATTATAGATCAGATGGAGTTTATTCTTTTCAAGATCTCTATATTAGAAAAAGAACTCTCCTAAATGCTGGTCTTACTATTCAAGACGAGGGTCAAGACTATGATGCTGGAACTTATTCTGGTATTAGCGTTGTCGGTGGTTCTGGTTCTAATGGTCTTCTGGATCTAGTAGTTGAAGCATTTAATGGTAGTATAACCAATAGTGGATCTAATTATCCATCAGGAAATTATTCTGATATTCCACTGAATAGTAATGGAAGTGGCACTGGTGTTGTTGTAACTTTTGGAACACCAGATCCTGTAATCGGAATTGGCAATGCAGGTAGTGGATATGATGATAATGAATATGGATCTATCGCTCCTGTATCATCTGGAAATGGCGAAGGTTTAATTGTAGACCTGACTATTTCTGGTGGTGTATTGACTGCAGTAGAAGTAGCAGAACCAGGAACAGGTCACCTTTCAACTGATACATTTACAATTGATAACACTACACTAACTTACATTGATGAAAATTCAGGACTTGAAGTTCAAAGTGGTGGTTCTGGAATTCAACTAACTATCACAAATAATTGCAATGAAGTTAATTCTGAAACGCTAAGTTTTTCGGAAAAAGGCAGTGGACATGCTCCTGGTGATCTTCTAACAACTCCTGGAAGTGTTACTAAAACTGGAAATCTTCCTGGAGTTGTTACAGGACTTGCAACAACAGTTAGCACTGCTAGCACAAACATTACTGTTTCTTCCACTGCAGGTATTGTCGCTGGAATGATTGTTGCACAAACGGCTGGTGATGGTGCTATTGAAGGAAGTTCTGTTGTCGCTAGTGTTGTTAATGGAACAACTGTTCAGTTGTCAGAACTGCCAACTGTAGATGGTACAGCAACTCTTGATTTCACAAGTGATCCAATTAATATTATCACCTTTGCTGATGCTAGTGATATTATTTCTGGAAGTAGCATTTCTGGTGGTGGATATAGTGGAACTGTTGGCAGTGTAGATTATGAAACGAATGAAGTTCAACTAGATCCTGATCCTACGAGTGGTGGTGCTACGGGAGTAACATTTACAATCAATCCTCCATATGGCAGTGGATCTGGATTTGAGTATACTATCAATCAAGTAGGTGTTATTACAAACACTTCGGTTTCATCTGGTGGAGCAGGAAATGGTTATGCTGTAGGAGATGTAGTTAGTGTAAATCCACTTGCACTGACGGCACCACTTGAATATAGCGTTACTGTATTTGATGGTCAGTTGCTAACAGTTGCTTCTGGAATTAACGTTAGTGTTGGTAGTGTTATTAATGCATACACTCCACCAGATACTGAAGCAGGAACACCAGCAGAATATGGAGAAGATCTAGAAGTTATCGCAATCACAGCAGGAACTCCTGGTAATGCTACAGGATTTATTGCTAGTGCTGCAACACAACTTGATGCAGGTGCTCAGTTTGGTATTAATAGTTCTGGTGTATTTACAGTTGCATCATATGATCCTGCTGGAAGATATTATATTGATGATGGAAATGGATCAACACTCCAACCTAATCTAACTCTTTACGTAGGAAATACATATTTCTTTAATCAAACTGATGGAACGTATGGTGCTCACCCACTTACTTTCTCCCAACACCCTGACGGAACACACAATCAAGTAACAGGAGTCAACACTACCGATTTGGTTAGTGGTAGTGATACATTTACTGTAGATAATTCTGCAGGAATTCTGGTTGGAATGATCATCGCTAAAACTGATGATGAAGGTACTGGTGCAGTTCCTTTGGGAGCAACAGTTACTAGTGTTGTTGGAACCACGATTACAATGAGTGGGGCAGCAACTGCTGCAGGAGCAGCAGAACTATCGTTTACTGGTGCAATATACACCGATGATGTAACACTTAGTTCAACTGGTCCCAGTATTACAATTACTGCTTCTACACCAAATCCTCTATACTATTTTTGTAGTGTTCACCCAAATATGGGTGGTCAGCATACCATTGATGCAAATAATCCAAAGACATTTGGTTCAGGATTTGAACTTCTAATTAGTTCTGTTGACGTAGATGACATTATTAGTGGAGACATCAATTCTGGAACCTTTGATGCTGTTACCCTAACTTCAGAAACTTCTACTATTGGTGAAGGTACATTTAGTACCAGTGTTACTACTCCATCAGCAACTGCAAATACTCTCAATGCATCTGATATTATTGGCATTGGCAGCAATAATTTAAATATTTCAGCAACAGGAAACATTGTATTCCAAGCTCCTGAACTTAGATATGGAACAGGTATTGTATTTAATTCTACTCTAAATCAGATTGAATCTAGCGGAGAAATCAAAACCACAAACAGATTCAATGTCAATGATAGATTGTTCATTCAAGGGACTAACATTTCGTCAACATCCCTCGATGATATTCTTCTTACTCCTGGTCTCGGTAGGGTAGCAAAAGTAGACACAACTACAGCATTTACTATTCCTGTTGGTACTACAAATGATCGTCCTGGAGCACTTGCTGTTGAAAGTGGTCAGATTAGATTTAACACAGATACCAATCAATATGAGGGATATAGTTCTACTGCTGGTGCGTGGAACTCTCTCGGTGGTGTCCGTGACCTAGATGGAAATACTTACATTCTAGCAGAAGAGTTCATTGGTGCTAATGACAATACTTTGTATTTCGTTAATGATGCTGTTACTACGTTGAAGTTGGATAGAAACTTCCTTGACTTCTTCACAACCAAAAACATTAAGTCTACTAGAGTAGGAGCGCCAGCAAATAGAAATTGGAATACAAATACCCCTGTTACTGCTGGTGAATACCTCAAGTATGGATTGAACTTATATGAAGTCATGACCAGTGGTGTTACTGGAACATCTGGTAACGAACCTACAGATACAACTGGAAACAACTTCAATAATGGAAGTGCTGTTCTAAGATATGATTCTCTTGCTGCAGCACCAATTGACTTTGACGAAGTTGAATTGGTTAGAATTGGTGCTAGCAATCCAATTCCTCTGGAAATTAATGGAGATCTAAAACTATTCAATAACACAATTTCTACTATTGTCAATGACATGGTGCTTGCACCAAACCCAGGTCAAAAAGTAAAAGTTGATTCTAATACTTCTTTTGTAGTTCCAGTTGGAGATTCTAACTCTAGAGGAAATGCTGAACAAGGATCCATCCGCTACAATACTTCTGATTCAACCTACGAAGGTTATGATGGAACTCAGTGGGGATCTCTTGGTGGTGTCAAGGACGTTGACCAGAATACATACATTATTCCAGAGACTGCTCCTGGCGCAAACGAGAACATCCTATATTTCTATAATAATGGATTGAACACCTTGCGAGTTACGGAAACCGCAATGGAGTTCCAAGACATTGATACTATCACTTCTCTGGGAGCAGGTGGAGCTAAAGATCTACTTAACATCAATGCTAATGTCGTAACATTTGACAATCTTGCTACAAGTCTTCAGAACACTGATGCTAGCAGATCTTTCTTCTTTACTACAAAGCAGAACTTTGACTTCGGTCTATCTTCAGGTCTGACTACAGATACTCTAGTGAGACTAACTGATGATGGCGATATCTTCTTCAACCTAGGTTTTGGAACTGGAGTTTATAATGGTCTCAAGATTATTAACGAAGACCTAACTGCAGTAGAACTGCAGAAGTATGCAGTACGCACAGATCAAACTGCTCTAACAAAAGATACTATTGATCAAGGTGCTACTGTTCTATATAATCCAACTGATGAGGCATCCGCTAAAGTCATATTGACTGCACACAATAAGACTTCTGGTCAAAAGGAATTCTTGGAGTTTGCGGTTATTGACAATGGAACGGATATTGTATATACAGAATACAATAACCTCAAGACGGGTCAAGAAATTGTATCAGTCCTCTTTGACTTCGATGCTAACAACAATGTTCGTCTTACTTACACATTAGACAGCGGTCTAAACCCAAACAACGCAGTAGACGTGACAGTAGTCACATACGTAACTAAGAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b31b27aeed7a64d146836e609e27329ced732cc0d0ca2cd7d55c9dde07b873bd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8258
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50