Protein

View in Explore
Genbank accession
CBZ13171.1 [GenBank]
Protein name
dextranase
RBP type
TSP
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,79
Protein sequence
MSLFDIKPWIVKKKDGTKKQVMPQTTIKGVIGLEKELTSIKAVGRSKGDKRDTGATGTQGPQGPQGPQGPKGPKGSIDGLQIGGRNLLLGTGNSDTGVGNNSGNQILAGYNLAGGKKLSDLYNQYGSSGHLTLSFDWVVSGDNISGKFIPQWDNIPWSGLANAGDIKPSDTNKSGHYESTIQLNFIGYSTGEAAGIVFRADNLQGNVTISNMKLEAGNVATDWTPAPEDLVSAGIKDFDDSATLLNINTDKAHYYPSEKVTFHATSMSGHGHLVVKYYNLNNLVATKEVYYGTSEISWSWFLPPTDNVGYSVVITNYVGNNKKSYKIAINVSNDPYNYPIMGFLSKYDTDSPIKRKDALDYMKRLHINLVQFYDWFDLHSLPLPVSNNGDSVQVSNTWTDIGNRLTRKKVIEDYCNLAKEYAMKPLAYMPMNGSDTNQPVHGLSADMFLYDDNSKNLDHVYKTLDKSKGWGKYNLYNTNWMNEHWQDYIDNQMRIVRDNMSFDGWHIDMFGNPGNKYESDGTEISSDTLEKGIHYFLDKAGKLGWDIGVNSVAEYGINDMKPVNALKYLYTEVWDNRKTYDDMFRLVRGLKESTDSDKKKKGTIIAAYMNYDYAKNNSGKDFNTDGIVLTDLVIMASGGTHLEMGEHMLCNEYFPDSNLNLPAQLKSDYLPKIYDFFVAFKEIIGLGHQVDGLATIENGSVDSLQSGQVCGISRGNSNDYLGLSLINLQTANTDWQDTNATTKITPAKDIKVTLKLEVTNHDWYYFDLENLEPRKLDVGADGVVNVSELHYFGFILGVPKK
Physico‐chemical
properties
protein length:801 AA
molecular weight: 89092,81740 Da
isoelectric point:5,61913
aromaticity:0,10487
hydropathy:-0,50387

Domains

Domains [InterPro]
DC_2057
STR
17–261
DC_2057 G3DSA:3.20.20.80
IPR013783
STR
239–334
IPR013783
IPR025092
ENZ
249–778
IPR025092
CBZ13171.1
1 801
Architecture
STR
ENZ
STR 17-685 | ENZ 686-778 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CBZ13171.1
1 801
Domain Start End Length (AA) Confidence
N-terminal 1 95 95 0,9852
Central domain 96 324 230 0,3041
C-terminal 325 801 476 0,1973
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-95
Central
96-324
C-terminal
325-801

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage EV3
[NCBI] 		980881 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CBZ13171.1 [NCBI]
Genbank nucleotide accession
FR798974 [NCBI]
CDS location
range 1 -> 2406
strand +
CDS
ATGAGTCTTTTTGATATAAAGCCATGGATAGTTAAGAAAAAAGATGGAACCAAAAAGCAAGTTATGCCACAAACCACTATTAAAGGAGTAATTGGTTTAGAAAAAGAGTTAACATCCATCAAAGCAGTTGGTAGGTCAAAAGGTGATAAAAGAGATACTGGAGCTACTGGTACACAAGGACCACAAGGACCACAAGGACCACAAGGACCTAAAGGACCTAAAGGTAGTATAGACGGTTTACAGATAGGTGGACGTAACCTATTGTTAGGTACTGGAAATAGTGACACAGGTGTCGGAAATAATAGTGGTAACCAAATCCTTGCAGGATATAATTTAGCAGGTGGTAAAAAATTATCAGACCTTTACAACCAATATGGTTCATCAGGGCACCTAACTCTATCATTTGATTGGGTCGTTAGTGGTGATAATATCTCTGGAAAATTCATTCCTCAATGGGATAACATCCCGTGGAGTGGCTTAGCAAATGCTGGTGATATCAAGCCAAGTGACACAAACAAATCAGGTCACTATGAAAGTACCATTCAGTTAAACTTTATCGGTTATTCTACTGGTGAGGCTGCTGGTATTGTGTTTAGGGCAGACAATCTGCAAGGAAACGTAACAATTAGCAACATGAAGCTAGAAGCTGGTAACGTAGCTACGGACTGGACACCAGCTCCTGAAGATTTAGTTTCTGCTGGAATAAAAGACTTTGACGATAGTGCTACTCTGTTAAATATTAATACAGATAAAGCGCATTATTATCCTTCTGAAAAAGTTACTTTTCATGCTACCAGCATGTCTGGCCATGGTCATCTAGTAGTTAAATACTATAATTTAAATAATCTAGTGGCAACTAAGGAGGTTTATTATGGAACATCTGAAATTAGTTGGTCTTGGTTCCTTCCCCCTACCGATAATGTAGGTTATTCAGTTGTTATCACTAATTATGTAGGAAATAACAAAAAAAGTTATAAAATTGCAATTAATGTAAGCAATGATCCCTATAATTACCCTATTATGGGCTTTCTTTCTAAGTATGATACTGATTCTCCTATTAAGCGGAAAGATGCTTTAGATTATATGAAGCGCCTTCATATTAATCTAGTTCAATTCTATGACTGGTTTGACCTACATTCCTTACCATTACCTGTATCTAATAATGGTGATAGCGTACAAGTTTCTAATACTTGGACTGATATCGGTAATCGACTAACTAGGAAGAAAGTTATTGAGGACTATTGCAATTTAGCTAAAGAATATGCAATGAAGCCTCTAGCTTATATGCCAATGAATGGTTCTGATACTAACCAACCAGTTCATGGTTTATCTGCTGATATGTTCTTATATGATGATAATTCTAAGAATTTGGACCATGTCTATAAAACCTTAGATAAGTCTAAGGGTTGGGGGAAATATAATCTTTATAATACAAACTGGATGAATGAACATTGGCAAGATTATATTGATAACCAGATGCGGATTGTTAGGGACAATATGTCATTTGATGGTTGGCATATTGATATGTTTGGTAATCCCGGAAATAAATATGAGAGTGATGGTACTGAAATATCTAGTGATACTTTAGAAAAAGGTATTCATTATTTCCTAGATAAAGCAGGAAAACTTGGTTGGGATATTGGCGTTAATTCTGTTGCTGAATACGGAATCAATGACATGAAGCCTGTTAATGCTCTTAAATATCTTTATACAGAAGTTTGGGATAATCGCAAGACTTATGATGATATGTTTAGGCTTGTTCGAGGTCTTAAAGAATCAACTGACAGTGATAAAAAGAAAAAGGGTACAATCATAGCCGCTTATATGAATTATGATTACGCTAAAAATAATAGCGGTAAAGACTTTAATACTGACGGAATTGTTTTAACCGACTTGGTTATTATGGCTAGTGGTGGTACTCATCTGGAGATGGGTGAACACATGCTATGCAATGAGTATTTCCCAGACTCTAATCTCAATTTGCCAGCACAATTAAAGTCAGATTACTTACCAAAGATTTATGATTTCTTTGTTGCCTTTAAGGAAATCATTGGTCTAGGTCATCAAGTTGATGGTCTAGCTACTATTGAGAATGGTAGTGTAGATTCCTTACAAAGTGGACAGGTTTGTGGAATCAGCCGCGGTAATTCTAATGACTACTTGGGATTGAGCTTGATTAATCTTCAGACTGCTAATACTGATTGGCAAGATACTAACGCTACTACTAAAATTACCCCTGCTAAGGACATCAAAGTAACCCTTAAGCTCGAAGTTACTAATCATGATTGGTATTATTTCGACCTTGAAAATTTGGAACCCCGTAAATTAGATGTTGGTGCTGATGGTGTAGTTAATGTTTCTGAGTTACATTACTTTGGTTTTATTTTAGGTGTCCCTAAAAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
68def1a7df55489ff21dd9920b3ca8f4e139c7621870bdbb0e5df4bead44523c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2855
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage-mediated transfer of a dextranase gene in Lactobacillus sanfranciscensis and characterization of the enzyme Picozzi,C., Meissner,D., Chierici,M., Ehrmann,M.A., Vigentini,I., Foschino,R. and Vogel,R.F. 2015 25771219 GenBank