Protein

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Genbank accession
QDP42856.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MTNLFRDYLYGNFPDPNKKIEEIGESVEGIDNKVGNLLRKNDGIASVLEYENLVLNKGTAIEDWKPAIQKAIDDINIRGGGKVRIPENTFQIYSMITVKPNVEVILDTGTIIKIMGDFDAFRINKNGKLTGGRIIVNGGPFTKSVVLLDGIDKFSTNYHNTSIKDLEIIGLYGIYTGSAIRMYAKGDGYNICWVTTNNVTISYFEKGIFLDCQDVGGGKYQWVNGNFFSNIGISHCVYPIYLGGSTALPNETSGNTFNGLQIQAGSMMQRYIYISGSNNRFDGMLWDPQASPTVSKVEFSATSAYNVVQTNLSKTQTNAILDRGISNSVTGAQNSFTKALIPPSSLPAENFSGNQDDFFAFADKRYTVTQTAGAPLTAGALSSLFNPNPDLSVTWDASLATAQNPIVIEIDFLGASITYLGNFGISSGPWKEQPKNIKIEWFDGTNWQLVIDATENYNQHYVCPISKNSVRKVRFSFYGTDGTTSMRINRIFAQAGTQVGHTWLPRNGGALYGDIDMSTKQVKNSSAVQLTNTTSASVANNSLFLEGGVLKFKDNAGVVKTVTLS
Physico‐chemical
properties
protein length:565 AA
molecular weight: 61737,80910 Da
isoelectric point:6,17461
aromaticity:0,10442
hydropathy:-0,19894

Domains

Domains [InterPro]
IPR012334
STR
56–350
IPR012334
IPR011050
STR
63–307
IPR011050
DC_0399
RBD
264–330
DC_0399
QDP42856.1
1 565
Architecture
STR
STR 56-350 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDP42856.1
1 565
Domain Start End Length (AA) Confidence
N-terminal 1 59 59 0,9787
Central domain 60 498 440 0,9557
C-terminal 499 565 66 0,9288
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-59
Central
60-498
C-terminal
499-565

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage vB_BmeM-Goe8
[NCBI] 		2593638 Uroviricota > Caudoviricetes > Herelleviridae > Goettingenvirus > Goettingenvirus goe8
Host Bacillus megaterium DSM 319
[NCBI] 		592022 Bacillota > Bacilli > Caryophanales > Bacillaceae > Priestia > Priestia megaterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDP42856.1 [NCBI]
Genbank nucleotide accession
MN043729.1 [NCBI]
CDS location
range 42256 -> 43953
strand +
CDS
ATGACAAATCTTTTTCGTGATTACCTATACGGAAACTTTCCAGACCCAAATAAGAAGATTGAAGAGATTGGGGAAAGTGTAGAAGGTATTGATAATAAAGTTGGAAATCTATTAAGAAAAAATGACGGTATAGCAAGTGTTTTAGAATATGAGAATTTAGTTTTAAACAAAGGGACAGCAATAGAGGACTGGAAACCTGCTATTCAAAAAGCCATTGATGACATAAATATCAGAGGTGGAGGGAAAGTTAGGATACCTGAAAATACTTTTCAAATTTATTCAATGATCACTGTTAAGCCTAATGTTGAAGTTATATTAGACACAGGAACAATTATTAAAATTATGGGAGATTTTGATGCTTTTCGAATCAATAAAAACGGAAAGTTAACTGGCGGAAGAATCATCGTAAACGGTGGTCCCTTTACAAAAAGTGTCGTTTTACTCGATGGGATAGATAAATTCTCAACAAACTACCATAATACGTCTATTAAGGACCTTGAAATTATCGGGCTTTATGGAATTTACACAGGTAGCGCTATTCGTATGTACGCAAAAGGTGACGGTTATAACATCTGTTGGGTTACTACAAATAACGTTACAATCAGCTATTTTGAAAAGGGAATCTTTTTAGACTGTCAAGATGTAGGTGGCGGAAAATATCAGTGGGTAAACGGAAACTTCTTCAGTAATATCGGAATCTCTCACTGTGTTTACCCTATTTACTTAGGCGGCTCTACTGCTTTACCTAATGAAACGTCTGGAAATACGTTTAATGGTTTACAAATACAAGCCGGAAGTATGATGCAACGATACATCTATATTAGCGGTTCAAATAATCGCTTTGACGGTATGTTATGGGACCCTCAAGCGTCACCAACTGTATCTAAAGTTGAGTTTTCTGCAACTTCAGCATATAACGTTGTGCAAACGAATTTATCAAAAACCCAAACAAATGCTATTCTTGATAGAGGAATAAGTAACTCTGTAACAGGCGCACAAAACTCTTTTACAAAAGCTCTTATTCCTCCAAGCTCTCTACCTGCGGAAAACTTCTCAGGGAATCAAGATGACTTTTTTGCTTTTGCTGATAAACGCTATACAGTGACACAAACAGCAGGAGCACCATTGACCGCAGGAGCTCTATCTAGTTTATTTAATCCTAACCCTGATTTAAGTGTAACTTGGGACGCTTCCTTGGCTACAGCGCAAAATCCGATTGTAATTGAGATTGATTTTCTGGGGGCTTCTATTACTTATTTAGGTAACTTCGGTATTTCAAGTGGACCTTGGAAAGAGCAACCTAAGAACATCAAAATTGAATGGTTTGATGGGACAAACTGGCAACTGGTGATTGATGCTACAGAAAACTACAATCAACATTACGTTTGCCCTATCAGTAAGAACAGTGTACGAAAAGTTAGATTTTCGTTCTATGGTACAGATGGGACTACCTCTATGAGGATAAATAGAATATTTGCTCAAGCTGGAACGCAAGTAGGGCACACATGGTTGCCTCGTAACGGTGGAGCTTTATATGGCGATATTGATATGAGCACTAAGCAAGTGAAAAACAGTAGTGCAGTTCAATTAACCAACACTACAAGTGCTAGTGTAGCTAACAACTCTCTCTTTCTTGAAGGTGGAGTATTAAAATTTAAAGATAACGCAGGAGTAGTAAAGACAGTAACCCTTTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cae6dd07434e0609f51c1920d1c2ad5a76420fd4a6e20ed1817e49beabb680e9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7888
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50