Protein

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Genbank accession
AFU64099.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
Protein sequence
MQNNTLKHISDESKYVTFDPTNSGFNENITNVQDALSAISVDGISGVPQATETVAGKARIATQLEVDAGVSADTFITPATLSYRMQRPEASTTVLGVTQYATDEEAIAGTATNRTIVASSLKATIDNVFTVRTSTETSNGVLKISSTPAAQAGVDDTTAMTPLKTKQAIAAATALIPAWGPATESEQGVVRLATLSQLRDPNIRDGYSVSPFTLNQWQSTESNLGAIKLATSGHMDGGSDHTTAVTPYRFASTRATTGRAGTTILSNDLNGDDSKALSANSAVLPSNRAAVSAGVYEHDTAADNKYMTRNNLKAYLPVGTMTLAAYNYDTGNCLKCNGRWLNKHQWPELFAVIGFTYGGDWGDNFAIPDMRGLVPRGFDDGRGLDPGRGFGSYQEDTMQQITAGWTMDDQAVTSNYPPSGACEARDYGSVNYDAGSDDRKWRGFRMYFDSARQTRVSHETRQKNLALNYVIVAR
Physico‐chemical
properties
protein length:474 AA
molecular weight: 50910,65340 Da
isoelectric point:5,27542
aromaticity:0,07806
hydropathy:-0,41329

Domains

Domains [InterPro]
DC_0176
STR
1–450
DC_0176
IPR037053
ATT
305–371
IPR037053
SSF88874
STR
309–471
SSF88874
IPR011083
ATT
319–375
IPR011083
AFU64099.1
1 474
Architecture
STR
ATT
STR
STR 1-304 | ATT 305-375 | STR 376-471 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage STML-198
[NCBI] 		1204531 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Gelderlandvirus
Host Salmonella
[NCBI] 		590 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFU64099.1 [NCBI]
Genbank nucleotide accession
JX181825 [NCBI]
CDS location
range 121915 -> 123339
strand +
CDS
ATGCAAAACAACACTCTAAAACACATATCAGATGAATCCAAATATGTAACATTTGACCCAACTAATAGTGGTTTTAATGAAAATATAACTAATGTGCAGGATGCTTTATCTGCTATTAGCGTTGATGGTATTTCAGGAGTTCCACAAGCTACGGAAACTGTCGCAGGTAAAGCTAGAATTGCAACTCAATTGGAAGTCGACGCTGGTGTTTCTGCGGATACATTTATAACACCAGCAACGTTATCATATAGGATGCAACGTCCAGAAGCGAGTACAACTGTACTTGGTGTAACTCAATATGCGACTGATGAAGAGGCTATAGCTGGAACTGCTACAAACCGCACTATTGTTGCGTCATCGTTGAAGGCCACAATAGATAATGTTTTTACAGTCAGAACATCAACTGAAACTTCCAACGGTGTTTTAAAAATATCATCTACACCAGCTGCTCAAGCCGGTGTAGATGATACTACAGCAATGACACCATTAAAAACCAAACAAGCTATAGCTGCAGCAACTGCTCTTATTCCAGCTTGGGGACCTGCTACTGAATCAGAGCAAGGTGTAGTTCGTTTGGCAACATTGTCTCAATTAAGAGACCCTAATATAAGAGACGGTTATTCAGTGTCTCCATTTACGTTGAATCAGTGGCAATCTACTGAGTCAAATTTAGGTGCTATTAAGCTTGCAACATCAGGTCATATGGATGGAGGTTCTGACCATACAACTGCTGTAACTCCATATCGTTTTGCTTCCACTAGAGCGACAACAGGAAGAGCAGGGACAACTATTTTGTCCAATGATTTGAATGGAGATGATTCTAAAGCATTATCAGCTAACTCAGCAGTTCTTCCAAGTAATAGGGCAGCAGTATCAGCTGGAGTATATGAACATGATACTGCCGCTGATAACAAGTACATGACACGAAATAATCTTAAAGCTTATTTACCTGTTGGTACTATGACACTTGCTGCTTATAATTACGACACCGGTAATTGCTTGAAATGTAATGGCCGTTGGTTAAACAAGCATCAATGGCCTGAATTATTTGCTGTCATTGGATTTACTTACGGCGGAGATTGGGGAGATAACTTTGCTATTCCTGATATGCGAGGCTTAGTTCCGCGTGGATTTGATGATGGTCGTGGACTGGACCCGGGCCGAGGCTTTGGTAGTTATCAAGAAGACACGATGCAGCAAATAACTGCCGGATGGACAATGGATGACCAAGCAGTAACTTCAAACTATCCTCCTTCGGGAGCCTGTGAAGCTAGAGATTATGGCTCTGTCAACTATGACGCAGGTTCTGATGATAGAAAATGGCGCGGATTTAGAATGTATTTCGACTCAGCTAGACAAACTCGAGTTTCTCATGAAACTCGTCAGAAGAACCTTGCACTTAACTATGTAATTGTAGCTCGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2b5cc54307a14c115c0f676b52aa6a927576e52d07aa7c33039ae3a8b5d352ef
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7627
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages quickly and effectively reduce contamination of various foods with Salmonella Woolston,J., Parks,A.R., Hanna,L.F., Charbonneau,D. and Sulakvelidze,A. 2016-07-02 — GenBank