Protein

View in Explore
Genbank accession
QIG69089.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTIENMELVRGSKGGGKGKGGSGGSNASNTLRSKARARWIEIISEGPCVGVVGASIDRGVYFEQTPVRNENGSLNFKDVIINQRLGYPDQAHLNGFAQVETPFQVDTQVKYNTGPVVRTISEENADAVRVVVKLPALVKQDKKTGKLKTASVSYAIDVRGYQGGWQRAHTENLVNQKCTSAVQRAHRIELPFGGHPWDIRVVRLTEDSDTDTLSNDTIFESYTVIVEGKFTYPHTALVAMEVNAEDMGQSIPARNYRYRGLIISVPSNYNPITRTYTGFWDGTFKQAWTNNPAWIFYDLLTNNRYGLGEFVSAQIVDKWSLYQIAQYCDEQVKTGFRNTDTGEMLYEPRYTYNGVLRSRQDAWRVLQQISTAWRGMAYWSLGQVFATADMPSDPVKLFTPANVIGGEFNYSGTSQKARHTVCLVGYNNPDDFYRPDIEPVPHEEGLHRWGWREKAVSLDGCTSRGLAHRYGKWILDVEQNETETAEFSASWDSTDVRPGDIIAIADPAKAQVRIGGRLKAAEETQLWLDGPFKPALGATYQVYVTLPNGQVKLCDIASFANELFEEGESVGYDRIVLADPLDDLPLVNSMWVMRGTDIQPRLYRVITIKEDKKNIFKITALFHDPNKYARVEDMGTLQPTTYTRPKNESLPVENLQVNEVSYLENGLPKSTLTLSWSNPRDFLTKEYEVAMLSPTSGYNIVGTTQNNSIDITELPIGDYTFYVYAISFSSVRSQPAMIDYEIAGWAAAAAPTVSDLKLEDSVDGEHFSGQVATISWKNNFPVTTSQTAEGGAVANVRSPFYDFNTVKVWDSTTGTLLRTQKIESSIYSYTLEMNIADAKRLSLAGPTRTLRFDVTVTDTLARESNPATISVSNPTPAAFNPTAFVVVNNIHLSWPAQIDTDFAGVLVWIETNNTFDPYATEPRYDGLGGAFVFPGEELQTYYIRVAAYDTFGKTGLNISPALMVSTTAMFETDPPAIPTGLAATTSFVDGVARVSATWNANTETDVVAYDFAIKQGSGNWVALPVAQTSCEFDAIPGVIYEIKVRARDRLGNVSDYCESITIAAVVDTVAPSVPLNVGAVGLFRSVWLDWDLSPETDVDFYEVEASKGGLSTIYFCKAPAFIHSSLTVGDVWSYRVRAVDTSANRSDWGSVATATVGAINPGDLPPDALISTFALIDEAFIESAHIVEIDAGKIKAGSILSGSVIVATSGGNIPLADIGAGGDPADTINNGTTQIEPGMIKISSGVSLADWRYGGDTTMINGGSLAANSVHANVLTIGMRGITTDGLNFEHNSPSINSVSWTAGTIRYMGDDGNPASRAISASNAAWTTGFLYLVWIKGANTLTATTDPAVAFDTNSVILALYLGGKDLTANYGRTTIDGSNIKTGTITATAMAVSSLSAISANIGTVTSGLMQSSDGKMQIDLTNKRILIAD
Physico‐chemical
properties
protein length:1433 AA
molecular weight: 156048,02970 Da
isoelectric point:4,92063
aromaticity:0,09560
hydropathy:-0,17704

Domains

Domains [InterPro]
IPR053171
Unmapped
13–743
IPR053171 DC_1241 IPR013783 IPR013783
DC_0129
STR
25–818
DC_0129 IPR003961 IPR036116
IPR055385
ATT
99–227
IPR055385 IPR032876 IPR003961 IPR003961 IPR036116
DC_1500
RBD
1007–1429
DC_1500
IPR003961
STR
1071–1146
IPR003961
QIG69089.1
1 1433
Architecture
STR
ATT
STR
ATT
STR
ATT
STR
RBD
STR 25-98 | ATT 99-227 | STR 228-358 | ATT 359-514 | STR 515-818 | ATT 864-971 | STR 972-1162 | RBD 1163-1429 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG69089.1
1 1433
Domain Start End Length (AA) Confidence
N-terminal 1 12 12 0,9590
Central domain 13 211 200 0,0545
C-terminal 212 1433 1221 0,0594
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-12
Central
13-211
C-terminal
212-1433

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_N1_10
[NCBI] 		2509740 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG69089.1 [NCBI]
Genbank nucleotide accession
MN988505.1 [NCBI]
CDS location
range 41997 -> 46298
strand +
CDS
ATGACCATTGAAAATATGGAGCTTGTTCGCGGCTCCAAGGGCGGCGGTAAAGGCAAGGGCGGCAGCGGCGGTTCAAACGCGAGCAATACGCTGCGCTCGAAGGCACGCGCCCGCTGGATCGAGATCATCTCGGAAGGTCCATGCGTCGGTGTTGTCGGCGCATCCATCGACCGCGGCGTCTATTTCGAGCAGACGCCTGTCCGCAATGAAAACGGCTCGCTGAACTTCAAGGACGTCATTATCAATCAGCGCCTCGGTTATCCCGACCAGGCGCATCTGAACGGCTTTGCCCAGGTTGAGACGCCGTTCCAGGTCGACACCCAGGTCAAATACAATACCGGCCCGGTCGTCCGCACCATCAGCGAAGAGAACGCCGATGCCGTGCGCGTCGTCGTCAAACTGCCGGCACTCGTCAAGCAGGACAAGAAGACCGGCAAGCTGAAGACCGCATCGGTCTCCTATGCGATCGATGTGCGTGGTTATCAGGGTGGCTGGCAGCGCGCCCATACCGAGAACCTGGTCAACCAGAAATGCACCTCGGCTGTGCAGCGGGCTCACCGCATCGAGCTGCCGTTCGGCGGTCATCCCTGGGATATCCGTGTCGTCCGACTGACGGAAGACAGCGACACCGACACGCTCTCCAACGACACCATCTTCGAGAGCTACACGGTTATCGTCGAGGGCAAGTTCACCTATCCGCACACCGCGCTGGTCGCGATGGAAGTCAATGCCGAGGATATGGGCCAGTCCATTCCGGCGCGCAATTACCGCTACCGCGGCCTGATCATCTCGGTGCCGTCGAACTACAACCCGATCACCCGCACCTATACCGGCTTCTGGGATGGCACGTTCAAGCAGGCCTGGACGAATAACCCGGCCTGGATCTTCTACGACCTGCTGACCAATAATCGCTACGGGCTCGGTGAGTTCGTCAGCGCCCAGATCGTCGACAAGTGGTCGCTCTACCAGATCGCCCAGTATTGCGATGAACAGGTCAAGACGGGCTTCAGGAACACCGACACGGGCGAGATGCTCTATGAGCCCCGCTACACCTATAACGGCGTTCTGCGCTCGCGACAGGACGCCTGGCGCGTGCTGCAGCAGATCTCGACCGCCTGGCGCGGCATGGCCTACTGGTCGCTCGGCCAGGTCTTCGCGACGGCTGACATGCCGTCCGACCCGGTCAAGCTGTTCACGCCGGCCAACGTCATCGGTGGCGAGTTCAACTATTCCGGCACGTCGCAGAAGGCGCGTCATACCGTTTGCCTGGTCGGCTACAACAACCCGGACGATTTCTATCGCCCGGACATCGAGCCCGTTCCCCATGAGGAGGGTCTCCATCGCTGGGGCTGGCGCGAAAAGGCTGTGTCGCTGGACGGCTGCACCTCGCGCGGCCTGGCGCATCGCTACGGCAAATGGATCCTCGATGTCGAGCAGAACGAAACCGAGACGGCTGAATTCTCGGCCTCCTGGGATTCGACCGACGTCAGGCCCGGCGACATCATCGCGATCGCCGATCCGGCCAAGGCGCAGGTTCGTATCGGTGGCCGCCTCAAGGCTGCCGAGGAAACCCAGCTCTGGCTCGACGGCCCCTTCAAGCCGGCGCTCGGCGCCACCTACCAGGTCTATGTCACCCTGCCGAACGGTCAGGTGAAGCTCTGCGATATCGCATCCTTCGCCAACGAACTCTTCGAAGAGGGTGAAAGCGTCGGCTACGACCGTATCGTGCTCGCCGATCCGCTCGACGATCTGCCGCTGGTCAACTCGATGTGGGTCATGCGCGGCACGGACATTCAGCCGCGCCTCTACCGCGTCATCACCATCAAGGAAGACAAGAAGAACATCTTCAAGATCACGGCGCTGTTCCATGATCCGAACAAGTATGCCCGCGTCGAAGACATGGGCACGCTGCAGCCGACCACCTACACTCGCCCGAAGAACGAGAGCCTGCCGGTCGAGAACCTGCAGGTCAACGAGGTCAGCTACCTCGAAAATGGCCTGCCCAAATCGACGCTGACGCTCTCCTGGTCGAATCCACGCGATTTCCTGACGAAGGAATACGAAGTCGCGATGCTGTCGCCCACGAGCGGCTATAACATCGTGGGCACGACGCAGAACAACTCGATCGACATCACCGAGCTGCCGATCGGCGACTATACCTTCTACGTCTACGCCATTAGCTTCTCGTCCGTGCGCTCGCAGCCCGCCATGATCGACTATGAGATCGCCGGCTGGGCGGCTGCGGCCGCGCCGACGGTGTCGGATCTGAAGCTCGAGGATAGCGTCGACGGCGAGCACTTCTCGGGCCAGGTCGCGACGATCTCCTGGAAAAACAATTTCCCGGTCACCACCTCGCAGACGGCCGAAGGTGGCGCCGTCGCCAATGTTCGCAGCCCCTTCTACGACTTCAACACGGTCAAGGTCTGGGATTCGACCACCGGCACGCTGCTGCGCACTCAAAAGATCGAGAGCTCGATCTACAGCTACACGCTGGAAATGAACATCGCCGATGCCAAGCGTCTGTCGCTGGCCGGCCCGACGCGCACGCTGCGCTTCGACGTCACCGTGACCGACACGCTGGCTCGCGAAAGCAATCCCGCGACGATCTCGGTCTCCAACCCGACGCCGGCCGCCTTCAACCCGACCGCATTTGTCGTCGTCAACAATATTCACCTGAGCTGGCCGGCGCAGATCGATACCGATTTTGCCGGCGTTCTGGTCTGGATCGAAACCAACAACACCTTCGATCCCTATGCGACTGAACCGCGGTATGACGGTCTGGGCGGCGCCTTCGTCTTCCCTGGCGAGGAGCTGCAGACCTACTATATCCGCGTTGCCGCCTACGACACATTCGGTAAGACCGGCCTGAACATTTCGCCGGCGCTGATGGTCTCGACGACGGCCATGTTTGAGACCGATCCGCCGGCCATCCCAACCGGCCTTGCTGCTACGACGAGCTTCGTCGATGGGGTCGCGCGCGTCTCTGCGACCTGGAATGCCAACACCGAGACCGACGTTGTCGCCTATGACTTCGCGATCAAGCAGGGTTCGGGCAACTGGGTCGCCCTGCCGGTGGCGCAGACCTCTTGCGAATTCGATGCCATCCCGGGCGTGATCTATGAGATCAAGGTCAGGGCACGCGATCGACTGGGCAATGTCTCCGACTACTGCGAGAGCATCACGATTGCTGCGGTTGTCGACACCGTCGCGCCGTCTGTGCCGCTGAACGTCGGCGCCGTCGGCCTGTTTCGCTCGGTCTGGCTGGACTGGGATCTGTCGCCGGAAACCGACGTCGACTTCTACGAGGTCGAGGCGTCCAAGGGCGGGCTCTCGACCATCTATTTCTGCAAGGCGCCGGCCTTCATTCACTCGTCACTCACTGTCGGCGACGTGTGGAGCTACCGTGTCCGCGCTGTCGACACCTCGGCAAACCGGAGCGACTGGGGCAGCGTTGCGACGGCGACCGTCGGCGCCATCAACCCGGGCGATCTGCCGCCTGACGCCCTGATCTCGACCTTCGCCCTGATTGACGAGGCTTTCATCGAGAGCGCGCACATCGTTGAGATCGACGCCGGCAAGATCAAGGCTGGCTCGATTCTGTCGGGTAGCGTTATCGTCGCAACCAGCGGCGGAAATATTCCGTTGGCTGATATTGGCGCAGGTGGCGATCCGGCCGACACGATCAACAACGGCACGACCCAGATCGAACCGGGCATGATCAAGATCTCCAGTGGCGTCTCGCTGGCCGACTGGCGCTATGGTGGCGACACCACGATGATCAACGGCGGCTCGCTGGCTGCCAACTCGGTTCACGCCAACGTGCTGACGATCGGCATGCGCGGTATCACGACCGATGGCCTGAATTTCGAGCACAACAGCCCGTCGATCAACAGCGTCTCCTGGACGGCCGGCACCATCCGCTACATGGGTGATGACGGCAATCCGGCGAGCCGCGCCATCAGCGCCTCGAACGCCGCCTGGACGACCGGTTTCCTCTATCTGGTCTGGATCAAGGGCGCGAATACGCTCACGGCAACGACCGACCCGGCTGTCGCCTTCGACACCAACTCGGTCATCCTGGCGCTTTACCTGGGCGGCAAGGATCTGACGGCCAATTACGGCCGCACGACGATCGATGGCTCGAACATCAAGACCGGCACCATCACGGCGACGGCAATGGCCGTTTCGTCGCTGTCGGCGATCTCGGCCAACATCGGCACGGTCACCTCGGGTCTGATGCAGTCGTCGGACGGCAAGATGCAGATCGATCTGACCAACAAACGTATTCTGATCGCGGACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a50b68af0d5a5cc7d7616ed8b1bdfc461cdc37a34ae468bf3733fbbdbbef32dc
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8235
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank