Protein

View in Explore
Genbank accession
QDH85611.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNMALRTFGGGPADVTSDATGQVVAGISLQVFTAAVGGQRVTELYDINGTPLPGVVTSSTEAGKLGRIEFSAAEDYSVLFLDPGYGMRWVVPAREAFNLTTQAVAKAEQAIALAENAVTHPQLDAVFLNPSTFPTVYPHQFGAKGDGATDDTIAVQAAVDYLNARGGGVLSYDPSVGSGFYQQHDIQLGPNITVEGNGCRIRARGYACFHAGSGTKKGYGAYTKNLVFRNLVFQGDFDTLRDCALTFHHTENVLFENCTWIEAMGSGHCLDLCGVKNVTFRSCKFLGYRYAGRDHAEAIQIDHSTANGLDNKDPAGTYDGLPCVNITVQDCVFDQLVKGSTTYEAPTPFGNHVHMLQLHQNLRFIGNYVRGAHYVSAQANANGWLHTYGVDGFEVSGNTFESTGASMIVIRVRTQTTGILPINYESQTGPTSSEIGAVPSRRIRISGNAFKGFASDANTLPLIKIDGLSGAPVTDVAVEGNTFTDCYPEARKATGGDYGPDTIALSYVSGVIVRGNSFRHVRRLVFLSVCDNVTVEANTAADVYWSAIILDTSGRNHVLRGNTLERYVVGISVVGVVNCVVQGNTLKDSRNATGLWTGYDAPIRFSAGARGSVIGNIVESTTPPAFQAAQAIKFTGTHTGGLYGSNLQSGHTKEATVDTGSTVTAK
Physico‐chemical
properties
protein length:666 AA
molecular weight: 70862,39400 Da
isoelectric point:5,97835
aromaticity:0,09009
hydropathy:-0,09024

Domains

Domains [InterPro]
DC_1436
ATT
3–200
DC_1436 IPR006626 IPR006626 IPR011050
IPR011050
STR
134–482
IPR011050 IPR006626 IPR006626 IPR006626
IPR012334
STR
139–522
IPR012334
IPR039448
ENZ
388–586
IPR039448
IPR011050
STR
437–620
IPR011050
IPR006626
Unmapped
473–515
IPR006626
QDH85611.1
1 666
Architecture
ATT
STR
ATT 3-200 | STR 201-627 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDH85611.1
1 666
Domain Start End Length (AA) Confidence
N-terminal 1 150 150 0,9835
Central domain 151 655 506 0,9973
C-terminal 656 666 10 0,2611
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-150
Central
151-655
C-terminal
656-666

Taxonomy

  Name Taxonomy ID Lineage
Phage Brevibacterium phage AGM1
[NCBI] 		2591411 Uroviricota > Caudoviricetes > Agmunavirus >
Host Brevibacterium aurantiacum
[NCBI] 		273384 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Micrococcales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
2dad7d92ee3db3575ddd6ec0d7f022b1a44f91e20e9caeaa0fbf282bd00d83e5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7999
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50