Protein

View in Explore
Genbank accession
QGZ17773.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MILKSILKINPDAKFNIIGDNIDTCEIQWLDGTTPIPKADIEAKMVEVQAEYDTEEWKRNRQAEYPSIQDCIHALLDGGDTLTELQEKRQEIKAKYPKS
Physico‐chemical
properties
protein length:99 AA
molecular weight: 11362,77610 Da
isoelectric point:4,73005
aromaticity:0,06061
hydropathy:-0,66566

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC026P
[NCBI] 		2686456 No lineage information
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ17773.1 [NCBI]
Genbank nucleotide accession
MN698240.1 [NCBI]
CDS location
range 29131 -> 29430
strand +
CDS
ATGATTTTAAAATCAATATTAAAAATAAATCCTGATGCAAAATTTAATATTATTGGAGATAATATAGATACTTGCGAAATACAATGGCTAGATGGAACAACACCTATTCCTAAAGCTGACATAGAAGCTAAAATGGTAGAGGTACAAGCAGAGTATGATACTGAAGAATGGAAAAGAAATAGACAAGCTGAATATCCATCAATACAAGATTGTATTCACGCACTATTAGATGGTGGCGATACACTTACTGAACTACAAGAAAAACGACAAGAGATAAAAGCTAAATATCCTAAATCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
5eed719a30bc986a3da94999b403f971dab695dc6c4273adf05d46f8f2431936
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9697
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank