Protein

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Genbank accession
YP_010674197.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,56
Protein sequence
MAIETNAVVITDLNPLYPRDRDYIYEGAAQIRLIKQTLKNTFPNVTEPVEIDSDTFKIMSEKLKFTGDAMDVGGLMIKNAAPGTGDKDVVTKGQMEAFMNNWMENKVFRIGSYYITEEDVNPGDSISLGFGSWAKVTGVIMGTGVVNPDGTVPNASRVEFTSGATGGRIFNTVQTENLPLMTINGSSFSVSSNTHAHNINFGRGDASGHNSSPNWYSPGSGFTHRTESDTHTHTISGSVSFGRDDISRQPINTLPPFRAAHIWRRIS
Physico‐chemical
properties
protein length:267 AA
molecular weight: 29127,14790 Da
isoelectric point:5,79186
aromaticity:0,08614
hydropathy:-0,38277

Domains

Domains [InterPro]
DC_0570
ATT
1–70
DC_0570 IPR053827
DC_1437
ATT
51–206
DC_1437
YP_010674197.1
1 267
Architecture
ATT
ATT 1-266 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010674197.1
1 267
Domain Start End Length (AA) Confidence
N-terminal 1 101 101 0,9803
Central domain 102 256 156 0,0068
C-terminal 257 267 10 0,9954
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-101
Central
102-256
C-terminal
257-267

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoP_WFI101126
[NCBI] 		2508203 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010674197.1 [NCBI]
Genbank nucleotide accession
NC_070991 [NCBI]
CDS location
range 13991 -> 14794
strand +
CDS
TTGGCTATTGAAACTAATGCGGTCGTGATTACCGACCTGAACCCGCTCTATCCCAGAGATAGGGATTATATCTACGAAGGGGCGGCCCAAATCCGCCTCATTAAACAAACATTAAAGAACACATTCCCTAATGTCACTGAGCCTGTTGAGATTGATTCTGATACCTTTAAGATTATGTCAGAGAAACTCAAATTCACTGGTGATGCGATGGATGTTGGCGGTCTTATGATTAAGAATGCTGCTCCGGGAACTGGAGATAAAGATGTTGTTACTAAAGGCCAGATGGAGGCTTTTATGAACAACTGGATGGAAAATAAAGTATTCCGTATTGGGTCTTACTATATCACTGAAGAAGATGTTAATCCGGGTGATTCTATCTCTCTTGGGTTTGGCTCTTGGGCTAAAGTTACTGGCGTTATCATGGGTACTGGTGTGGTCAACCCTGATGGTACAGTTCCTAATGCCTCTAGGGTTGAGTTTACTTCTGGGGCTACTGGTGGTAGGATCTTCAACACAGTTCAGACAGAGAACTTACCGTTGATGACTATTAATGGTTCGAGCTTTTCTGTTTCCAGTAACACTCACGCACACAACATTAACTTTGGTCGTGGGGATGCTAGCGGTCACAACAGTTCCCCTAACTGGTATAGTCCCGGTTCTGGATTTACCCACAGAACAGAGTCTGATACTCACACCCACACAATATCTGGTTCTGTTAGTTTTGGACGTGACGACATATCTCGTCAACCTATTAACACTTTGCCACCATTCAGAGCGGCTCACATTTGGAGACGTATTAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e6a6cc7a50c5bc7a06105145cdb4055814474b4a41d802c319c058600e3df0f9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6952
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Still something new to discover - new insights into E. coli phage diversity and taxonomy Korf,I.H.E., Adriaennsens,E., Dreiseikelmann,B., Kropinski,A., Nimtz,M., Meier-Kolthoff,J.P., Rohde,M., van Raaij,M. and Wittmann,J. 2019-05-17 — GenBank