Protein
View in Explore- UniProt accession
- A0A879R192 [UniProt]
- Protein name
- C1q domain-containing protein
- RBP type
-
TF
- Protein sequence
-
MSTLKVNYIQANTTSEIDINSPLGTIPSLDVTGSATIGGNLNITGVSTFTGNSYVAGSLGIGTASPGTKLHLIGNQYLQGGNYFTDTTSGYFWAGNGSFAGGIYGSNSGNVTTIISPQTINFVTSSTQRLSIDSSGRITAPFQPSCSVYLSTNQNITSSTWTQLNINTSRFNTGNNFNTSTYTFTAPVAGKYFISYTVNFALDTTIVNSGSYLYTAIKVNGAFYHYGQGFRNSVIWKNDSTLSAGQLVNLAANDTVNLWAYSDGNNVVASGSERSHLAVHLLG
- Physico‐chemical
properties -
protein length: 283 AA molecular weight: 29925,54870 Da isoelectric point: 6,88817 aromaticity: 0,11307 hydropathy: -0,07032
Domains
Domains [InterPro]
DC_0300
STR
104–282
STR
104–282
IPR001073
RBD
139–283
RBD
139–283
IPR008983
RBD
143–276
RBD
143–276
IPR008983
RBD
144–283
RBD
144–283
IPR001073
RBD
159–272
RBD
159–272
1
283
Architecture
STR 104-283
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Synechococcus phage S-SRM01 [NCBI] |
2781608 | Uroviricota > Caudoviricetes > Pantevenvirales > Serangoonvirus > Serangoonvirus essarone |
| Host |
Synechococcus sp. [NCBI] |
1131 | cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae |
Coding sequence (CDS)
Coding sequence (CDS)
No CDS data available.
Genome Context
Genome Context
Tertiary structure
PDB ID
c56cfac0c7606db5153c8b294f017f3933a0419af80e1a64db303c5f3c51635b
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50