Protein

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Genbank accession
QNO11594.1 [GenBank]
Protein name
tailspike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSSGCGDVLSLADLQTAKKHQIFEAEVITGKSGGVAGGADIDYATNAVTGQTQKTLPAVLRDAGFSPVSWDFSTGGTLTANDRDKVVYDPVSKTWYSYTGTLPVVVPASFNPVGNANWKPQTDPDLRNDLSSTDNATLGDAMVGVRQPFTDAVGRTQHDKNREVVSVLDFYLGTDPDYTNALNRALTASNGVLVPQGEYSTSLLSHPTCSLFGTGGGVLKQSNDSGNHLIFDKPAGGLLSTLSIVGNKATDSTQGQQVSFAGGQDVTIKGIDFKNAKGTGFSLIAYPSGGGPSGYIVSGIRGDYSGYATNKTAGCVMFESASNTIINDVIARNYPQFGAVELKTDAKCNVVSGVIGQSCQHVVYNGTETTNAPSSNIISNVVANNAKYAAVVAGKGSGNLVTNVVADYSSSEATQAHGVTIQGDYNAADNILMVGCSGTNSLGQTQTATSIRFSDGASNNYASVFPMYSASGVVTLATGATRNFVEVKHPGPKNSLLSSLSTITGVSSIDGTATSNVVHAPAIGQYIGSMSGRFEWFTKYIDTSALPFVTADKFRLISDGATSLAIGGGTTSQIRLLTSDGTFRTISLVNGNLRLASDTSAYIQIAPTGITPSSANTVAIGSASRALSGGFTQTAFTVTSDERAKTLPLELTDAMLDAWAEVNLVQYKYLDRVAEKGEDAARWHFGVVAQRAIEAFTRHGLDATKYGFLCYDKWEASPEIIDEESGEVLTKATAAGERYGIRYDEVLILEAALQRRKAAQLEKRIIALEALVATLTNS
Physico‐chemical
properties
protein length:778 AA
molecular weight: 81637,91390 Da
isoelectric point:5,29571
aromaticity:0,07712
hydropathy:-0,10771

Domains

Domains [InterPro]
DC_0018
ATT
1–256
DC_0018 IPR030392
G3DSA:2.10.10.80
ATT
65–133
G3DSA:2.10.10.80 IPR012334 cd10144
IPR011050
STR
175–441
IPR011050 IPR030392 Coil
IPR012334
STR
185–640
IPR012334 cd10144
IPR036388
RBD
641–767
IPR036388
QNO11594.1
1 778
Architecture
ATT
STR
RBD
ATT 1-256 | STR 257-640 | RBD 641-772 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QNO11594.1
1 778
Domain Start End Length (AA) Confidence
N-terminal 1 177 177 0,9935
Central domain 178 542 366 0,9874
C-terminal 543 778 235 0,9526
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-177
Central
178-542
C-terminal
543-778

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_fFiEco02
[NCBI] 		2762426 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNO11594.1 [NCBI]
Genbank nucleotide accession
MT711523 [NCBI]
CDS location
range 23611 -> 25947
strand +
CDS
ATGTCAAGCGGATGCGGTGACGTTTTAAGCCTGGCGGATTTACAGACCGCCAAGAAACACCAGATTTTCGAAGCCGAGGTTATCACCGGCAAATCCGGCGGTGTTGCAGGTGGCGCCGATATTGATTACGCGACAAATGCCGTTACAGGGCAGACCCAAAAGACGTTACCAGCCGTGTTGCGTGACGCTGGTTTTTCTCCGGTGTCATGGGACTTTTCCACTGGTGGTACGTTAACCGCTAATGACCGCGACAAAGTGGTGTATGACCCTGTAAGCAAGACGTGGTACTCGTATACCGGGACTCTGCCGGTTGTTGTCCCCGCATCGTTTAACCCGGTTGGTAACGCTAACTGGAAGCCGCAGACTGACCCGGATTTGCGCAATGATTTATCCAGCACAGACAATGCGACATTAGGTGATGCCATGGTCGGCGTCCGACAACCATTTACCGACGCTGTCGGCAGGACGCAACACGATAAAAATAGAGAAGTAGTTTCCGTTCTGGACTTCTATTTAGGTACTGACCCTGATTACACAAACGCCCTTAACCGAGCGCTTACAGCTAGTAACGGGGTGCTTGTACCGCAAGGGGAGTATAGTACGTCGCTACTCTCCCACCCGACATGCTCTCTATTCGGAACAGGGGGTGGGGTTTTAAAACAATCAAACGATTCTGGAAACCACTTAATCTTTGATAAACCTGCAGGAGGGCTACTTAGCACCCTGAGTATTGTAGGAAATAAGGCAACGGACTCCACACAGGGTCAGCAGGTTTCCTTCGCCGGTGGGCAGGACGTTACTATTAAAGGTATTGATTTTAAAAATGCAAAGGGAACTGGATTTAGTTTAATAGCATACCCTAGTGGTGGGGGTCCGTCTGGATACATTGTAAGCGGCATACGGGGCGACTACTCCGGGTATGCTACAAATAAAACAGCGGGGTGCGTGATGTTTGAGTCCGCAAGTAATACTATAATCAACGATGTTATCGCCCGAAACTACCCCCAATTCGGGGCGGTTGAGTTGAAAACAGATGCTAAATGTAATGTTGTTAGTGGCGTCATTGGGCAAAGCTGTCAGCACGTTGTTTATAATGGCACCGAGACGACCAATGCCCCTAGCAGTAATATTATCAGTAATGTTGTTGCTAATAACGCTAAGTATGCCGCTGTGGTCGCCGGCAAGGGTTCAGGTAATCTGGTGACAAATGTCGTAGCTGATTACTCCTCCTCCGAGGCCACGCAGGCACACGGCGTTACAATACAAGGCGACTATAATGCCGCTGATAATATTCTAATGGTTGGGTGCAGCGGAACTAATAGTTTAGGGCAAACGCAAACCGCGACTTCTATTAGGTTTTCAGACGGAGCTAGTAATAACTACGCATCGGTTTTCCCTATGTATAGTGCTTCCGGGGTTGTTACACTAGCGACAGGGGCTACCCGTAACTTTGTGGAAGTAAAGCACCCTGGACCCAAGAACAGTCTTCTTAGTTCACTATCTACTATAACCGGGGTCTCTAGCATTGATGGTACTGCCACCAGTAACGTGGTACACGCCCCCGCTATAGGACAATACATAGGGTCCATGTCCGGTAGGTTTGAGTGGTTCACTAAGTATATAGATACTTCTGCATTGCCTTTTGTGACAGCTGATAAATTCAGACTAATTTCCGATGGGGCTACATCTTTGGCTATTGGGGGAGGTACGACCTCTCAGATAAGATTACTCACATCTGATGGTACTTTTCGAACTATTTCTCTGGTTAATGGTAATTTACGCTTAGCCTCTGACACATCGGCGTATATTCAAATAGCCCCGACGGGTATTACACCATCCAGCGCAAACACCGTCGCTATCGGGTCGGCAAGTCGCGCTTTGTCCGGCGGATTCACTCAAACAGCGTTTACGGTTACGTCCGACGAGAGAGCCAAGACACTACCCCTGGAATTAACTGACGCTATGTTAGACGCTTGGGCTGAAGTTAATTTAGTTCAATATAAGTACCTGGATAGGGTTGCAGAGAAGGGGGAGGATGCAGCTAGGTGGCACTTTGGAGTAGTAGCCCAACGAGCAATTGAGGCGTTTACCCGGCACGGGTTGGACGCGACTAAGTACGGTTTCCTGTGCTACGATAAGTGGGAAGCGTCTCCGGAAATTATTGATGAGGAATCTGGGGAAGTATTAACAAAAGCTACGGCGGCAGGGGAGCGGTATGGTATTCGTTATGATGAGGTATTGATATTAGAGGCTGCGTTACAGCGACGTAAAGCAGCTCAGTTAGAGAAAAGGATTATAGCGCTTGAGGCATTAGTGGCTACCCTGACAAACAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
db1d13a29f28580a4caae10865098b1b49a3be90a71a3d11e23ad86e47f79801
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7977
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of six Escherichia phages belonging to Genus Kagunavirus Patpatia,S., Wicklund,A., Skurnik,M. and Kiljunen,S. 2024-10-19 — GenBank