Protein

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Genbank accession
QIW88029.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSVDTTPIPPVIPGTTTVPEAIDSANTAFGRIRDVSILANSNEVAIGDVGQLETSDKTSLVAALNSVYDEFLNGFLLEKITGNLLDLTTTSKNNLVAAINEHDNEIGNLNALQTPSKLSLVSAINSIASASTSIGDMSILMTQDRFTLVGAINDVYRSVGFIGNLATGDDNLISAVNKNHAAIGDMSALITTRKNSLVEAINELKVRADGFLKLDGTNSPSADINFNGRKLRNLGLSVLETDAVPRGQVAEIARTGNLNNLQTQNKNTLVNAINEVVVGIGSLSGLKTAEKSSIVNAINELYDNIGYSDKQENLELVSTVNFGRGVGTSRNQSFNFFSTPNATRDYDFRIQRMSGDNGHAVFDNRGTGMFNFGFVGTYRVRIQNDANNPLQVLSGGTWKNIAFAGDYLTTTGGILTGTVTIKPDAASGGIAIQPSGTKTGMIVGYNPAGQLKWSIGEQDANGPVELKIGNGTSGWKIDGNLDVAGTITTPNDISGLSDASLKSDVETIKDGLSCVSAMRGVKYNMHGSPGRGVIAQELEKIDPHLVHTNHDGIKSVKYMQLAGYFIEAIKELKSTMEYENRLLREEIKKLKGIE
Physico‐chemical
properties
protein length:594 AA
molecular weight: 63367,43760 Da
isoelectric point:5,25609
aromaticity:0,05556
hydropathy:-0,18401

Domains

Domains [InterPro]
DC_0811
STR
2–74
DC_0811 DC_0811 DC_0203
DC_0811
STR
69–159
DC_0811 DC_0811 IPR030392
QIW88029.1
1 594
Architecture
STR
RBD
STR 2-433 | RBD 464-594
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Agrobacterium phage OLIVR6
[NCBI] 		2723774 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhizogenic Agrobacterium biovar 1
[NCBI] 		1183400 Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales > Rhizobiaceae > Agrobacterium >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIW88029.1 [NCBI]
Genbank nucleotide accession
MT234343.1 [NCBI]
CDS location
range 61276 -> 63060
strand -
CDS
ATGTCCGTCGATACAACTCCTATTCCTCCCGTAATTCCTGGCACGACCACTGTTCCTGAGGCTATCGACAGCGCAAACACCGCTTTCGGTCGTATCCGAGATGTGTCTATTCTGGCTAACTCGAACGAAGTCGCCATCGGTGATGTCGGTCAGTTAGAAACCAGTGACAAGACGAGTCTCGTAGCAGCCCTCAATTCTGTTTATGATGAGTTCTTGAATGGCTTCCTTCTCGAGAAAATCACAGGAAACCTCCTCGATCTTACGACGACTTCGAAGAATAACCTAGTCGCAGCTATCAACGAGCACGACAATGAGATCGGTAACCTGAATGCTCTTCAGACTCCGTCTAAATTATCTCTCGTTTCTGCCATTAACTCTATCGCTTCCGCATCGACTTCGATCGGCGACATGTCTATTCTGATGACCCAGGATCGATTTACCCTCGTGGGCGCTATCAACGATGTGTATCGTTCGGTAGGCTTCATTGGTAACCTTGCAACCGGCGATGACAACCTCATCTCTGCGGTCAACAAGAACCATGCTGCTATCGGTGACATGTCTGCTTTGATCACGACCAGGAAAAATAGCCTTGTCGAAGCTATCAATGAGCTGAAAGTTCGTGCCGATGGTTTCTTGAAGCTCGACGGAACGAATTCTCCTTCTGCTGACATCAATTTCAATGGTCGAAAGCTCCGGAACCTTGGTCTTTCGGTCTTAGAAACTGATGCTGTTCCTCGTGGCCAAGTTGCCGAAATCGCCAGAACTGGTAATCTCAACAACCTTCAGACTCAGAACAAGAACACTCTCGTCAACGCGATCAACGAAGTCGTAGTAGGAATCGGTTCTCTCAGCGGTTTGAAGACTGCAGAAAAATCGTCTATTGTCAATGCGATCAATGAGCTCTATGACAACATCGGCTACTCTGACAAGCAAGAAAACCTGGAACTTGTCTCGACCGTGAACTTCGGTAGAGGTGTAGGCACGAGCCGAAACCAGTCGTTCAACTTCTTCTCTACGCCGAATGCCACTCGAGACTACGATTTCCGTATCCAGAGAATGTCAGGCGATAACGGTCATGCGGTCTTCGATAACCGAGGCACAGGCATGTTCAACTTTGGTTTCGTAGGCACCTACCGAGTTCGCATTCAGAATGATGCCAACAATCCTCTACAGGTCCTCTCTGGCGGCACATGGAAGAATATCGCTTTTGCTGGTGACTATCTGACTACTACAGGTGGAATTCTGACTGGCACTGTTACGATAAAACCTGACGCTGCTTCAGGCGGTATTGCTATTCAGCCTTCTGGAACAAAGACCGGCATGATTGTCGGCTATAATCCAGCAGGTCAATTGAAATGGTCTATCGGTGAACAAGACGCTAACGGTCCAGTCGAACTCAAGATCGGAAACGGAACGTCTGGTTGGAAAATCGATGGCAACCTAGATGTAGCAGGAACGATTACCACTCCTAACGACATCAGCGGTCTGTCAGACGCATCTCTAAAATCAGATGTAGAAACTATTAAGGATGGTCTCTCTTGCGTCTCTGCTATGCGTGGCGTCAAATACAATATGCATGGTTCTCCAGGTCGAGGTGTTATCGCTCAGGAACTCGAAAAGATTGATCCTCATCTTGTTCACACGAATCACGATGGGATCAAATCTGTCAAGTATATGCAGTTGGCAGGCTACTTCATCGAGGCCATTAAGGAACTCAAATCTACGATGGAATATGAGAATAGATTGCTTCGAGAAGAGATCAAGAAACTCAAAGGAATTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9825497dd13eba26c49de0ae04824ee3d5df4e4f02ee6891c51aeda5c64cdb0f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6959
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50