Protein

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Genbank accession
AUR84403.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MASPVTVFRSTDDGAPQLDATPISMFNVIKACLIDGYGGKSPLGWSILFEDLTRGMVVLENATNSGVVRFSCENDAPDVTNGDTIIQVAKSASDVDTLIGTLPLLNRASSSSGIWWEIIGTDRGCHIIRHYSAHDDMYTSTSSAHWHVFIGDIDCYNANDAGRFTMVTGALVGNDNSSTSSSYSIGGSSIQSCELHDTDGVIHYEAYSSTATSWEYATSSATYNRNDIDSTNFELVLTPCVLNNNARTGTDRNGTLTLVSDVAPYVRGIVTGLYRMSIGSYHDGTPWPIDRTFNGLPYTKVRGANAGLLWIKTDEWY
Physico‐chemical
properties
protein length:317 AA
molecular weight: 34365,62580 Da
isoelectric point:4,67702
aromaticity:0,09464
hydropathy:-0,17697

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR84403.1
1 317
Domain Start End Length (AA) Confidence
N-terminal 1 11 11 0,9447
Central domain 12 210 200 0,0040
C-terminal 211 317 106 0,9987
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-11
Central
12-210
C-terminal
211-317

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.055.O._10N.286.55.E9
[NCBI] 		2070718 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterovibrio norvegicus
[NCBI] 		188144 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR84403.1 [NCBI]
Genbank nucleotide accession
MG592435 [NCBI]
CDS location
range 20879 -> 21832
strand +
CDS
ATGGCTAGTCCAGTAACAGTTTTTAGAAGTACAGACGATGGTGCGCCACAGTTGGACGCTACACCCATATCAATGTTCAACGTAATCAAAGCTTGCCTTATAGACGGTTACGGTGGTAAATCACCACTTGGTTGGTCGATTTTGTTTGAAGATTTAACTAGGGGTATGGTTGTATTAGAAAATGCTACTAATAGTGGTGTAGTACGTTTTTCATGTGAGAATGATGCCCCAGACGTCACAAATGGTGACACCATAATTCAAGTTGCTAAGTCGGCTAGTGATGTGGATACATTAATAGGCACCCTACCACTTCTGAATCGGGCTTCATCCTCATCTGGTATTTGGTGGGAAATAATAGGCACCGACCGTGGTTGTCATATAATTAGACACTATAGCGCTCATGACGATATGTACACATCAACTTCATCTGCCCATTGGCATGTTTTTATAGGCGACATTGATTGTTATAACGCAAATGACGCTGGTAGATTTACTATGGTAACTGGGGCACTTGTAGGTAATGACAATAGTAGCACATCTAGTTCGTATAGCATTGGCGGTTCTTCAATACAGTCTTGCGAATTGCATGATACAGATGGTGTTATACATTATGAGGCTTATAGCTCAACCGCCACCAGTTGGGAGTATGCCACAAGTAGCGCTACTTATAATCGTAACGACATAGACTCTACTAACTTTGAGTTGGTTTTGACACCATGCGTACTTAATAACAATGCTAGAACAGGTACTGATAGAAATGGAACTTTGACTTTGGTTAGTGATGTAGCACCCTACGTGCGTGGCATCGTCACTGGTTTATATCGAATGTCAATAGGTTCGTATCATGATGGTACACCTTGGCCTATTGACCGCACGTTCAATGGTTTACCATACACTAAAGTTCGAGGTGCTAATGCTGGTCTACTGTGGATTAAAACTGACGAGTGGTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4a0563daeaa2cb89839a22013d2bf72951ca8c0d58fcd020265c67c7ceb3f439
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6898
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank