Protein

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Genbank accession
YP_009786110.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGSAGYVGAQPYVHLINRDEFEQYFVVFTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLHYHTMPWALVRASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFAAQVINSTMTVLMSNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKGRVSVVFPDGKIVEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQTNIVTIESDASTPLNIIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:801 AA
molecular weight: 89952,38590 Da
isoelectric point:5,93305
aromaticity:0,11610
hydropathy:-0,37665

Domains

Domains [InterPro]
IPR058003
TTP
1–801
IPR058003
YP_009786110.1
1 801
Architecture
TTP
TTP 1-801
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009786110.1
1 801
Domain Start End Length (AA) Confidence
N-terminal 1 142 142 0,9933
Central domain 143 341 200 0,0728
C-terminal 342 801 459 0,1626
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-142
Central
143-341
C-terminal
342-801

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ECA2
[NCBI] 		1852630 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Teetrevirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009786110.1 [NCBI]
Genbank nucleotide accession
NC_047766.1 [NCBI]
CDS location
range 1073 -> 3478
strand +
CDS
ATGGCTCTCATTAGCCAATCAATCAAAAACCTCAAGGGTGGTATCAGCCAACAGCCAGATATTCTCCGGTTCGCTGAACAAGGTAGCGTACAGATTAACGGTTGGTCTTCTGAGTCCGAGGGCCTCCAGAAGCGCCCACCGATGATTCACCTTAAGACCCTTGGCTCTGCTGGGTATGTGGGTGCGCAACCTTACGTGCATCTCATCAACCGTGATGAGTTCGAGCAGTATTTCGTTGTGTTCACTGGTGAAGACATTAAGGTGTTCGATCTCGATGGTAAGGAGTATCAAGTCCGTGGAGACCGCTCATATGTTCGTACAGCTAACCCACGGGAAGACCTTCGGATGGTAACTGTGGCTGATTATACCTTTGTGACTAACCGCAAGGTGGTTGTACAGAGTAACGACCAATCGGTCAACCTTCCGGGCTTTAAAGACCAAGGCGATGCGCTGATTAATGTTCGTGGTGGACAATATGGGCGTAGACTATCAATCGAGTTCAACGGGGCTGAGCGTGCTGCTGTGCAACTACCAGACGGTTCACAACCAGCACACGTCAATGAGGTTGACGGTCAGGCTATCGCTGAGAAGCTGGCGGCTCAGTTGCGGAATAACCTAGGGAACCCAAACAATGACCAAGACCCAAATAAGTGGCGGTTCAATGTTGGCCCCGGATTCATCCATATCCTTGCGCCAAATAACGATAACGTTTGGGGACTACAGACTAAGGATGGTTACGCAGACCAGCTAATCAACCCTGTAACCCATTACACTCAGTCGTTCCAGAAGCTGCCTATCAACGCTCCAGATGGGTACATTGTGAAAATTGTAGGTGACACCTCCAAGACTGCCGACCAGTATTACGTTAGGTTCGACCTCAACCGTAAGGTATGGGTAGAAACAATCGGCTGGAACACAAGGACTCACCTACATTACCACACGATGCCTTGGGCGCTGGTACGCGCTTCTGACGGGAACTTTGACTTCAAGTACCTTGAGTGGGGTGCTCGTACTGTTGGCGATGATACAACTAACCCATACCCTTCCTTTACCGGACAGACAATCAACGATATTTTCTTCTTCCGAAACCGTTTGGGATTCCTTAGCGGGGAGAACATCATCTTGTCTCGCACCTCGAAATACTTCAACTTCTTCCCGGCCTCCGTGTCAAACTACTCCGACGATGACCCAATAGACGTTGCCGTTAGTCACAACCGGGTGTCAACCTTGAAGTATGCCGTTCCGTTCTCCGAAGAGTTACTCCTATGGTCTGACCAAGCGCAGTTCGTTCTGACAGCTTCTGGTATCCTTTCGAGTCGCTCCGTAGAGTTGAACCTTACTACTCAGTTTGATGTGCAAGACAGGGCACGCCCACATGGTGTAGGACGTAATGTATACTTTGCGTCACCTCGCGCTTCCTTCACATCCATTAACCGATACTATGCGGTACAGGATGTAAGCTCTGTGAAGAACGCAGAGGACATGACGGCTCACGTTCCGAACTACATACCTAATGGGGTATTTAGTATCTCGGGCACAACTGCTGAGAACTTCGTGGCTATCCTTACGAGTGGTGCGCCTAACCGAGTGTATATCTATAAGTTCCTCTACATTGACGAGGAAATCAGGCAGCAGTCGTGGTCTCATTGGGACTTTGGGGACAACGTTACGGTGTTCGCAGCACAGGTCATAAACTCAACAATGACAGTATTGATGAGCAACGAACATGCTGTGTGGATGGGGCGCTTACACTTCACGAAGGACTCCATAGACCTTCCGGGAGAACCTTACAGGTTGTATATCGACGCTAAGAGGAAGTACACCATCCCTGCTGGGACATACAATGATGATACCTACCAGACGTCCATAAGCCTCTCAACGATTTACGGGATGAACTTCACGAAGGGTAGGGTTTCGGTGGTCTTTCCTGATGGGAAGATTGTAGAGGTAGACCAGCCAATCAACGGTTGGAGCAGTGACCCGGTGTTACGACTTGATGGGAACCAAGAGGGACAAGTAGTCTACATTGGGTTCAACATCCCGTTCACTTATACGTTCTCGAAGTTCCTCATCAAGAAGACTGCTGAGGACGGCTCGACGGCTACCGAGGATATTGGTCGCTTACAGCTTCGGCGTGCATGGGTAAACTATGAGGATTCTGGCGCGTTCACCATCCGTGTGAACAACCTGTCCCGTGAGTTCATCTACACAATGGCTGGTGCTCGCTTGGGTTCTGACAATCTGCGTGTTGGCAGGTCGAACATTGGCACAGGGCAGTACCGCTTCCCGGTTGTTGGAAACGCTCAGACGAACATAGTAACTATCGAGTCAGACGCATCAACCCCACTGAACATCATTGGGTGCGGCTGGGAGGGGAACTACCTTCGTCGTTCTTCTGGCATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ca9c7df91e427a84f4d489ca38c29e845139c034b0d4b66e4ea83c954ce1e76c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8967
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and in vitro evaluation of new bacteriophages for the biocontrol of Escherichia coli Pereira,C., Moreirinha,C., Cunha,A., Lewicka,M., Almeida,P.J., Clemente,C., Romalde,J.L., Nunes,M.L. and Almeida,A. — — GenBank