Protein

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Genbank accession
WVX93270.1 [GenBank]
Protein name
baseplate hub protein
RBP type
TSP
Evidence RBPdetect
Probability 0,81
Protein sequence
MIKIIYKQDPLSEDKTIEHAETLGQWLTSKYDHMPEHVRIFHTISNMDHAEISFANEVTPKNAYELKQLDFLPGTFIVIENPKGIDPITLAWIAVASIVMGVAVALLMPVPSITQTNQNNNQSSSANNELSNRENKTRVNGRIADIYGAAHDTPDLITVPYKVYENNVEVEHVVGCIGRGHYKINGAYDGETNIVDIAGASVEVFRPGVDIVSGEPYFSLGTEITTPPLTVQHQTSVNGQVLRPADTQSLEGTNYLHFAYPNEILRATANNTDLTTKFVSNDRVEITNASFTFNGQTYDLNGTYSVLSVADDRMTLSNPAAVNANWLKLKELNNQQTAALSPKISSIGEKWIGPFILDNVERSRVLCNFVATNGLYTVSSGGNQGAVNVTIEVEVTPVNESGAAIGNPMLKQIILKGSAKSRQTVGATLDMVTFQGRCSVRARRLTPTPAVTTVVDEVKWQALYGAYPLQSTVYEHETVFRARTYATTGALSVKSRKINFDLQRMLPTFKNGAMTTELFPTSSFADALVSMALDDKIGRRTIDEIDLENIYRTYNDVVDYFGTPLAAEFCTTIDDTNLSFEELVTNLCDAVFCTAYRQNNKLKLYFERPTDNSVMLFNFRNIIPDSYKHDLTFGVMDDYDGLIYEYTDPTDDSRINIYLPDKGAKNPKEVKSVGVRNKWQAHFNAYRIWNKLRFQRKSITFDAAPESELLVLRDRIAVADYRNGIHQSGEVVQQEGLILTLSHDVDFIAGKSYVIYLQMGDGTVDLIPITPGSAKNKVVLGRLPNGALKLSPDDFVNTIYTVVNDDTKGSLPYLVAKREPADQFSNTITAINYDERYYLNDKDFIDVPVDDSPIYIRYDQLDINLARLYQMQRGDLPTTGEISFVVEAGALVSSSSSYRPETRFVYKFDYNSSPPKREYIVPAASELPAIDTGEFPPDLVVNLTIKGAVVGRGGDGGLPHLAFGAWSTDPDYNFTKTRRDGFQGAPGLLNRHSKLNLIIDGGTLARGGSGGGATPSGIYTGLSYGVQGIPGGAGAPFGRVMTGQPISSDSQDWRWYFGSYFNVLKITDAEASVPGKGYRTQNDRYGSPLSGDGGNWGERGTKSTNDGTWNWKYHGTTEGQPGPGGPAIVGVAPLTTQLINGGKILQTL
Physico‐chemical
properties
protein length:1148 AA
molecular weight: 126312,27680 Da
isoelectric point:5,28395
aromaticity:0,09408
hydropathy:-0,30209

Domains

Domains [InterPro]
DC_0118
STR
1–690
DC_0118 DC_0808
NF040662
Unmapped
360–838
NF040662 IPR007932
WVX93270.1
1 1148
Architecture
STR
RBD
STR 1-690 | RBD 706-1129 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVX93270.1
1 1148
Domain Start End Length (AA) Confidence
N-terminal 1 241 241 0,9193
Central domain 242 440 200 0,6734
C-terminal 441 1148 707 0,0936
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-241
Central
242-440
C-terminal
441-1148

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaS_Ftm
[NCBI] 		3119557 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVX93270.1 [NCBI]
Genbank nucleotide accession
PP236950 [NCBI]
CDS location
range 24065 -> 27511
strand +
CDS
ATGATTAAGATTATTTATAAACAAGACCCTTTATCCGAAGACAAAACAATTGAACATGCTGAAACTTTGGGTCAATGGCTTACTTCAAAATATGACCATATGCCTGAGCATGTCCGTATTTTTCATACCATAAGCAATATGGATCATGCGGAAATTTCATTTGCGAATGAAGTCACACCGAAGAATGCATATGAATTAAAGCAGCTCGATTTCTTGCCAGGCACTTTCATTGTAATTGAGAATCCCAAGGGTATAGACCCCATAACTCTAGCTTGGATAGCGGTTGCTTCTATAGTTATGGGTGTGGCTGTTGCATTATTAATGCCTGTGCCCTCAATTACCCAAACCAACCAGAATAACAATCAATCCTCGTCTGCAAATAACGAATTATCAAACCGTGAAAATAAAACTCGCGTAAATGGTCGTATCGCAGATATTTATGGTGCCGCTCACGATACCCCTGATCTGATTACTGTGCCTTACAAGGTATATGAAAACAATGTCGAAGTAGAGCATGTTGTTGGTTGTATTGGTCGTGGTCACTATAAAATTAACGGTGCATATGACGGTGAAACCAACATTGTTGATATTGCCGGCGCATCGGTAGAAGTCTTTCGACCGGGTGTCGATATTGTCTCGGGTGAGCCATATTTCTCGCTTGGTACCGAAATTACAACTCCACCCTTAACAGTTCAGCATCAAACTTCTGTTAATGGCCAAGTTTTACGTCCTGCTGATACACAATCTTTAGAAGGTACGAACTACCTTCATTTTGCATATCCAAACGAGATTCTTCGGGCAACGGCAAACAACACAGATTTAACCACTAAGTTTGTAAGTAATGACCGCGTAGAAATCACGAATGCCTCATTCACGTTTAACGGCCAGACTTATGATTTAAACGGCACTTACAGTGTTCTATCGGTAGCTGATGATCGAATGACGTTATCAAATCCGGCGGCCGTTAATGCTAACTGGTTAAAGCTTAAAGAGTTAAATAACCAGCAAACAGCAGCTTTATCACCAAAGATCAGTTCAATAGGTGAAAAGTGGATTGGTCCATTCATTCTGGACAATGTCGAACGAAGTCGGGTGCTATGTAACTTTGTGGCCACAAATGGACTTTACACAGTTTCTTCAGGTGGAAATCAGGGAGCTGTAAACGTCACGATTGAAGTAGAAGTAACGCCGGTAAATGAATCGGGTGCAGCCATTGGTAATCCAATGCTAAAGCAGATCATTCTAAAGGGTTCGGCAAAGTCACGTCAGACAGTTGGCGCAACGCTGGATATGGTGACATTTCAAGGTCGCTGTAGTGTCCGTGCACGTCGTTTAACACCAACACCGGCGGTTACAACGGTAGTAGATGAAGTAAAGTGGCAGGCGCTTTATGGTGCTTATCCTTTGCAAAGCACAGTGTATGAACATGAAACGGTTTTTCGTGCGCGCACTTATGCAACCACTGGAGCTTTATCTGTTAAGTCCCGCAAGATCAATTTTGATCTTCAGCGGATGTTACCGACTTTTAAAAACGGCGCAATGACGACAGAGCTATTTCCAACATCAAGCTTTGCTGATGCATTGGTTTCAATGGCACTGGATGACAAGATAGGCCGCCGTACGATCGACGAAATAGATCTGGAAAATATCTATCGGACTTATAACGATGTAGTTGATTATTTTGGTACACCACTTGCGGCTGAGTTCTGTACTACGATTGATGATACAAACCTGTCTTTTGAAGAGCTGGTCACCAATCTATGTGATGCAGTTTTTTGTACCGCTTATCGACAAAACAACAAGCTCAAGCTTTATTTTGAACGGCCAACTGATAACTCGGTAATGCTGTTTAACTTCAGGAATATCATTCCAGATAGTTACAAGCATGATCTAACCTTTGGCGTGATGGATGACTACGATGGACTGATCTATGAATACACGGATCCGACCGACGATAGTCGTATCAATATCTATTTGCCAGACAAAGGAGCAAAGAACCCGAAAGAAGTGAAATCCGTTGGGGTACGAAACAAGTGGCAAGCTCATTTTAATGCGTACCGGATCTGGAACAAGCTTCGGTTTCAACGTAAATCCATCACCTTTGATGCGGCGCCTGAGTCTGAATTGCTTGTGCTACGTGACCGTATTGCTGTAGCAGATTATCGCAATGGTATTCATCAAAGCGGGGAAGTGGTACAGCAAGAGGGTTTAATCCTCACCTTAAGCCATGATGTAGATTTCATTGCAGGCAAGAGCTATGTGATCTATCTGCAAATGGGGGATGGTACCGTGGACCTAATTCCTATTACACCGGGTTCAGCCAAGAACAAAGTTGTTTTAGGGCGTTTACCGAACGGGGCCTTAAAGCTTAGTCCCGATGACTTTGTGAATACTATCTACACGGTAGTTAATGACGATACCAAAGGCTCATTACCTTATCTGGTTGCAAAAAGAGAACCAGCTGACCAGTTCTCTAATACAATTACTGCAATTAATTACGATGAACGTTATTACCTCAATGACAAGGACTTCATTGATGTACCGGTAGATGATTCACCGATTTATATTCGATATGACCAGCTTGATATTAATCTGGCACGTTTGTATCAGATGCAAAGAGGTGATTTACCAACGACTGGCGAAATCAGTTTTGTAGTTGAAGCAGGTGCATTGGTTTCAAGTTCAAGTTCTTATCGACCGGAAACCAGATTTGTCTATAAATTCGACTACAACTCTAGTCCTCCAAAACGAGAGTATATCGTTCCAGCTGCATCAGAATTACCTGCTATTGATACTGGTGAGTTTCCACCTGATCTGGTTGTGAATCTGACGATTAAAGGTGCTGTAGTTGGACGTGGTGGAGATGGCGGGTTGCCACATTTGGCATTTGGTGCATGGTCTACCGATCCGGATTACAACTTTACAAAAACCCGTCGTGATGGTTTTCAGGGAGCACCCGGTCTATTAAACCGGCACAGTAAACTAAACCTGATTATTGATGGTGGAACTCTGGCTCGAGGCGGATCTGGTGGCGGCGCAACACCAAGTGGTATTTATACTGGATTATCGTATGGAGTTCAGGGTATTCCCGGTGGAGCTGGAGCACCTTTTGGTCGGGTTATGACAGGCCAGCCAATTTCAAGCGACTCACAAGATTGGCGCTGGTATTTTGGAAGTTACTTCAATGTCTTAAAAATTACTGATGCCGAAGCTTCGGTACCCGGAAAAGGCTACCGAACCCAAAATGACCGTTATGGATCCCCATTATCAGGTGATGGCGGAAACTGGGGCGAACGTGGTACCAAGTCTACTAATGATGGAACATGGAACTGGAAATACCATGGCACAACTGAAGGTCAGCCGGGGCCAGGTGGACCTGCAATTGTGGGAGTTGCACCACTGACAACTCAATTGATTAATGGAGGGAAAATCTTACAAACCCTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2b918ce936424b30687480e231c4a18f3924a813e42e70e2aab89641bb3a19dd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2805
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50