Protein

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Genbank accession
XOD31720.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKLTTEQKVAIREILKTKLSMGVSNVVFEKSDGTIRTMKGTRDADFMPTMHTGKLTESARKESTDMIPVFDVELVAWRGFSIDKLISVNGMKAEHLLQFICK
Physico‐chemical
properties
protein length:102 AA
molecular weight: 11508,41730 Da
isoelectric point:9,16613
aromaticity:0,05882
hydropathy:-0,15784

Domains

Domains [InterPro]
IPR024401
STR
13–86
IPR024401
XOD31720.1
1 102
Architecture
STR
STR 13-86 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage sb1
[NCBI] 		3387546 Viruses >
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOD31720.1 [NCBI]
Genbank nucleotide accession
PQ666539.1 [NCBI]
CDS location
range 134058 -> 134366
strand -
CDS
ATGAAACTGACAACTGAACAAAAAGTAGCAATTCGTGAAATTTTGAAAACTAAATTGTCCATGGGTGTTTCAAATGTAGTTTTTGAAAAGTCTGATGGTACTATTCGTACTATGAAAGGCACTCGTGATGCAGACTTTATGCCAACCATGCACACTGGTAAATTGACTGAATCTGCTCGGAAAGAATCTACTGATATGATTCCAGTATTTGATGTTGAGCTCGTTGCATGGCGAGGTTTTTCTATTGACAAATTGATTTCCGTTAATGGCATGAAAGCTGAGCATTTGCTTCAATTTATTTGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2bb211913ac23186ecdea52e04ffb94f6dfedfaada38c55f461dd2f53b7901cd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8230
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50