Protein

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Genbank accession
WPK19195.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFVRMLDYGNKVLPYIPNFVKLVTPSCGYSYTCTMMLDKNGSIWAIGLQNGGIFGLGHTNQVTEWTQIYSNVKDFWCSTMNSFCLIRTNDDRFFYSGLDKWLGNNTTNTVTTFTECTSYFAQFGISKIKEIYVGYDYALILDTDNSLYLLGDNTGAKFGINTASYYNKFTFLVDNVKKFCSSITPANWIIKLDDTMWRTGTTTSGTLGNSKQQTYVFPWVQYKGTPITEAIDIFCSSNYIGIITKGTPESCPMYTLGFQGYGQLGNNNVTSAYKLNPVLSTTVPDDSEFIRIENTSTRGLVYYSSGKIYSTGYNNNGQLANNTTRESGSFVEAILPGGVQFKKSESLVAGNDATLYMFINNKLYYAGKSPDNVSASSSSVMKEFLLPTI
Physico‐chemical
properties
protein length:391 AA
molecular weight: 43531,67610 Da
isoelectric point:6,58925
aromaticity:0,14066
hydropathy:-0,16982

Domains

Domains [InterPro]
DC_0433
ATT
1–129
DC_0433 DC_1778
IPR009091
STR
12–186
IPR009091 IPR009091
IPR009091
STR
18–273
IPR009091
IPR051553
Unmapped
25–271
IPR051553
WPK19195.1
1 391
Architecture
ATT
STR
ATT 1-129 | STR 130-391
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPK19195.1
1 391
Domain Start End Length (AA) Confidence
N-terminal 1 53 53 0,2621
Central domain 54 259 207 0,6347
C-terminal 260 391 131 0,6036
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-53
Central
54-259
C-terminal
260-391

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SD-6_S16
[NCBI] 		3096174 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK19195.1 [NCBI]
Genbank nucleotide accession
OR699182 [NCBI]
CDS location
range 145593 -> 146768
strand +
CDS
ATGTTACCTTTTGTAAGAATGTTGGATTATGGAAATAAAGTTTTACCATATATTCCCAATTTTGTTAAATTAGTTACCCCGTCATGTGGTTATTCATATACATGCACGATGATGCTTGACAAAAATGGTTCAATATGGGCTATTGGTCTTCAGAATGGTGGAATTTTTGGTTTAGGTCATACTAATCAAGTAACTGAATGGACACAAATATACAGCAATGTTAAAGATTTTTGGTGCAGTACAATGAACTCTTTTTGTCTAATACGCACAAATGATGATAGATTCTTTTATAGTGGTTTAGATAAATGGCTAGGTAATAACACAACAAATACAGTGACAACATTCACTGAATGTACAAGCTATTTCGCACAATTTGGTATTTCAAAAATTAAAGAGATATACGTGGGTTATGATTATGCTTTGATTTTAGATACAGATAATAGTTTATATTTGTTAGGTGATAATACTGGTGCTAAGTTTGGAATAAACACTGCATCATATTATAATAAATTTACATTTTTAGTGGATAATGTTAAAAAATTCTGTTCATCGATAACGCCAGCTAACTGGATTATTAAACTTGATGATACAATGTGGCGTACAGGAACAACAACTTCCGGTACTTTGGGAAATAGTAAGCAACAAACGTATGTATTCCCTTGGGTTCAATATAAGGGTACACCTATTACAGAAGCAATAGATATTTTTTGTAGTTCGAATTATATTGGTATTATAACAAAAGGTACACCAGAATCATGTCCAATGTACACTCTAGGCTTTCAAGGTTATGGTCAATTGGGTAATAATAATGTAACATCTGCTTATAAGTTAAACCCAGTACTATCAACTACAGTTCCAGATGATAGTGAATTCATTCGAATAGAAAACACTAGTACTCGTGGACTCGTATATTATAGTTCAGGTAAAATTTATAGTACTGGTTATAATAACAATGGTCAATTGGCAAATAATACTACAAGAGAATCAGGTTCATTTGTTGAAGCAATTTTACCAGGTGGTGTTCAATTTAAGAAAAGTGAATCACTAGTTGCAGGAAATGATGCAACATTGTATATGTTCATTAATAATAAATTATACTACGCAGGGAAATCACCAGATAATGTATCTGCAAGCAGTTCATCTGTTATGAAAGAATTCCTACTTCCTACAATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5899c0528880c179a0c4c819878879663dc582fe62a5e55560c1429754370d40
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8243
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence a group of lytic Salmonella phages Dlamini,S.B., Montso,P.K., Ateba,C.N., Mnisi,M.C. and Mlambo,V. 2023-09 — GenBank