Protein

View in Explore
Genbank accession
AAG59820.1 [GenBank]
Protein name
tail spike protein with colonic acid degradation activity
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MLQRLSTKLIQYNGEKLHTLIEPLLEEVNPIIRIPEDYPSLYAVGEYLTTVSYDNQAVVVEVAAGTYRETKSLHEVFGTKFGNGRIQIVGKGVDVTTFEFLKCDGIYAGHGTCFGHAPQYPVSGGDIHPIFKNCTLSGINRDDALDDPYKDAMGVRAFDGGLVVLDDTVRITNFSRVGVMAERHGIAFTPGTKVDTTGSDCFAASEGGYIYAPNTIADSPKGHCYIGYSGGQLYMPNSQAKNAALHGNVGGSGLVLTGHSYAYAINLQVTGCAQRPVSVAMGSVARCDALVEEGNSLPVSVSQNSTLFFPNAVIKKPSGQLALLIEKGGEAYANIASQDKLEVTGRITAQSMGILHAPNGTIANSSGNSLSVINSTVDVDRVTFTGAPAVAIYAQDGARVKCVNGSSETTSGSSIIAQNAEVSADNFRVGGNPSTGFRANKGGRIFAKNAVVQQAGQYGYIADGLGAYIDASSSSCGNAFTGYKVLGGGQILATGAQPTGQYGDAAYNPVVNTPTNHLGIIAQ
Physico‐chemical
properties
protein length:523 AA
molecular weight: 54699,63750 Da
isoelectric point:5,77907
aromaticity:0,07839
hydropathy:-0,06558

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AAG59820.1
1 523
Domain Start End Length (AA) Confidence
N-terminal 1 65 65 0,7960
Central domain 66 512 448 0,9905
C-terminal 513 523 10 0,5050
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-65
Central
66-512
C-terminal
513-523

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia virus K5
[NCBI] 		56637 Uroviricota > Caudoviricetes > Autographivirales > Molineuxvirinae > Zindervirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAG59820.1 [NCBI]
Genbank nucleotide accession
AF322018.1 [NCBI]
CDS location
range 1 -> 1572
strand +
CDS
ATGCTACAAAGATTAAGCACCAAGTTGATACAGTATAATGGTGAGAAATTACATACATTAATAGAGCCTTTACTTGAAGAGGTTAATCCCATTATCCGTATACCAGAAGATTACCCTTCGCTGTATGCGGTTGGTGAGTACCTTACTACTGTAAGCTATGATAACCAAGCAGTAGTAGTTGAAGTGGCAGCTGGTACTTACAGAGAAACTAAGTCACTACATGAAGTATTTGGAACTAAGTTTGGTAACGGTCGCATACAGATAGTTGGTAAAGGTGTAGATGTCACTACCTTTGAGTTCTTGAAATGTGATGGAATATATGCAGGACATGGTACTTGTTTTGGTCATGCACCACAGTATCCTGTAAGTGGCGGTGACATCCATCCTATCTTTAAGAATTGCACACTTAGTGGTATTAACCGAGATGATGCCCTAGATGATCCTTATAAAGATGCAATGGGTGTTCGTGCCTTCGATGGTGGTCTAGTTGTGCTTGATGATACTGTACGTATTACTAACTTCTCACGAGTTGGTGTAATGGCAGAGAGACATGGCATAGCGTTTACGCCTGGCACTAAGGTAGATACAACAGGCTCGGATTGCTTCGCTGCATCTGAAGGAGGTTACATTTACGCACCTAATACCATTGCAGATAGCCCCAAAGGGCATTGCTACATAGGTTATTCTGGAGGCCAGTTATATATGCCTAACTCGCAAGCCAAGAACGCTGCATTGCACGGTAATGTAGGAGGCTCAGGTTTAGTCTTGACAGGCCACTCATACGCGTATGCGATTAATCTACAAGTAACAGGTTGCGCACAAAGACCTGTAAGCGTAGCTATGGGTTCCGTAGCAAGATGTGACGCTTTAGTAGAAGAAGGTAACTCTCTTCCTGTTTCAGTGTCTCAAAACTCTACACTTTTCTTCCCTAATGCTGTGATAAAGAAACCAAGCGGTCAACTTGCATTACTTATAGAGAAAGGGGGAGAAGCCTATGCTAATATAGCTTCTCAAGATAAGCTAGAAGTTACAGGACGTATTACCGCTCAATCTATGGGTATCTTACATGCACCTAATGGTACTATTGCTAATAGTTCTGGCAACTCCTTGTCTGTAATTAATTCTACTGTAGATGTAGATAGAGTAACCTTTACAGGCGCTCCAGCGGTTGCAATCTATGCACAGGACGGGGCAAGAGTTAAGTGTGTGAACGGGTCTTCAGAAACCACTAGCGGTTCCTCTATCATAGCTCAGAATGCAGAGGTATCAGCAGATAACTTCCGTGTAGGTGGTAATCCATCTACAGGATTCAGAGCTAACAAGGGTGGTAGGATATTTGCAAAGAATGCAGTAGTGCAGCAAGCAGGTCAGTATGGATATATTGCAGATGGACTAGGAGCCTACATAGACGCTTCTTCCTCGTCTTGTGGTAATGCCTTTACTGGTTACAAGGTGTTAGGTGGGGGTCAGATTCTTGCTACAGGTGCACAACCTACAGGGCAATATGGAGATGCAGCTTATAACCCTGTAGTGAATACGCCTACAAATCATCTTGGAATTATTGCTCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
eb2383b34cdc31b56478916fa11067d962063cc2431a65724810d59dde5ea24c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8375
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage K1-5 encodes two different tail fiber proteins, allowing it to infect and replicate on both K1 and K5 strains of Escherichia coli Scholl,D., Rogers,S., Adhya,S. and Merril,C.R. 2001 11222673 GenBank