Protein
View in Explore- Genbank accession
- AYJ75551.1 [GenBank]
- Protein name
- putative minor structural protein
- RBP type
-
TSP
- Protein sequence
-
MALSGTISTSVRTHWKLSVSWSATQSISNNTSTITAKMYWEAVDGYGKIDSDSSVSKSGSIYIDGTWYNFSGAGLARLSPNQKKLIATKSKTVKHNADGTKSFSLGGWFDPDVDLGGHQGKISLSNKTFTLNTIPRKSTMSSGGDFTAGSDRTISISRASSSFSHKLYIDIKDSRGNWVNIKSINFSTSETSKSTSFSTGEKKTIFRALNERTSAQIRYSLHTLSGSNDIGYNTYYGTANRPKLSVVNKLNGQAGSSNSVYIDQSLTIDLTRYDSEFDHKVQVICGSFTKEFNGVGYTQSWTPTASEQSTLYGILNNVISKSATVRVYTYYNGVRVGSTDYGMTYYVRSSNNKPTFTDAGIFYTDTNPTTLNITADDQYIIQGVSTLSVEIPVESKAVAVNGATMKSYSITVNGETKNVAYSSTSTVHADFGTINSASNATISIKAIDSRGLSTAVTKTVKVVPYAYPSVTTTAKRTNGYERTTTLTLRGGLSPIAVNGSNRNALESARYRYKLTDATTYGSWNNFTVTGFPSYSATNVPLDLDENETWDVQVEVSDSLGVTTKTISVSAGRPIMFLDAQRKAVGIGDFPSNEYELKINGRIVFGETFWASDKGEGFGAIDLNNSDISNANGIYFADVAQNMNGEGLMFSKSGAQYGSKDLNDYDNLMVRDGVLYLNAAGSEMKLGNHLQMQNYDIRNVNHITINDPGGNEGIEWLGGSGWKIVEAPNNLSNTGGPLQFATGDTRKATISTTGNIYIAGNVFRGESGGYTYFASQAQACLISDAPGGASIRVHVDGKGGRVWSNDIYNRTYSGSANMHVTPDGTLGRISSSAKYKMEIKDIDTETLADRILKLKPKSWYDKAVVEALVNKLGTSMSDEESGEEIEEDIPYLERYYGFIAEDLVEVGLEMFATYGRADENGNRELEGIAYDRLWILLVPLVGKQRKQIEELKARLDQLEQTK
- Physico‐chemical
properties -
protein length: 961 AA molecular weight: 104710,94900 Da isoelectric point: 6,10805 aromaticity: 0,09573 hydropathy: -0,41093
Domains
Domains [InterPro]
DC_1676
ATT
4–126
ATT
4–126
IPR008577
STR
24–235
STR
24–235
DC_1334
RBD
880–961
RBD
880–961
1
961
Architecture
ATT 4-126 | STR 127-235 | STR 256-902 | RBD 903-961
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
961
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 139 | 139 | 0,0007 |
| Central domain | 140 | 385 | 247 | 0,7451 |
| C-terminal | 386 | 961 | 575 | 0,5627 |
Note: Constraints were applied during segmentation.
Fixed 126 C-terminal predictions appearing before Central domain
Fixed 126 C-terminal predictions appearing before Central domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-139
1-139
Central
140-385
140-385
C-terminal
386-961
386-961
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Bacillus phage BSP21 [NCBI] |
2301658 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Bacillus subtilis [NCBI] |
1423 | cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
AYJ75551.1
[NCBI]
Genbank nucleotide accession
MH707435
[NCBI]
CDS location
range 137888 -> 140773
strand +
strand +
CDS
ATGGCGTTATCAGGAACTATATCTACGTCCGTTCGTACTCACTGGAAGCTATCTGTAAGCTGGTCAGCTACCCAGAGTATATCGAACAACACGAGTACGATCACAGCAAAAATGTACTGGGAAGCTGTAGATGGCTATGGGAAAATTGACTCCGACTCCAGTGTATCGAAAAGTGGTTCTATTTACATTGACGGTACTTGGTACAATTTTAGCGGGGCAGGTCTAGCGAGACTTAGTCCAAACCAAAAGAAGCTAATTGCAACAAAATCTAAAACAGTAAAGCACAACGCCGATGGTACAAAGTCATTTAGTCTAGGTGGTTGGTTTGATCCTGATGTAGACCTTGGAGGACACCAAGGAAAGATCAGCCTATCGAACAAGACGTTTACACTAAATACAATCCCACGTAAATCTACAATGTCCTCTGGAGGAGACTTTACAGCAGGAAGCGACCGAACAATCTCAATCTCCCGGGCATCATCTTCGTTCTCCCATAAGCTGTATATCGACATTAAAGACTCTAGAGGAAACTGGGTTAATATTAAGTCCATAAATTTCTCTACATCGGAAACATCTAAGTCTACATCTTTCTCGACTGGTGAAAAGAAGACGATCTTCCGAGCTCTAAATGAGAGAACATCGGCGCAGATAAGGTATAGTCTTCATACCTTAAGCGGCAGTAACGATATTGGATATAATACCTACTATGGGACTGCAAATAGACCTAAGCTGAGTGTTGTCAACAAGCTTAATGGGCAGGCTGGCAGCTCTAATAGTGTATATATCGACCAGAGTTTAACAATTGACTTGACTCGATATGACAGCGAGTTCGATCATAAGGTGCAGGTCATCTGCGGATCGTTTACCAAAGAGTTTAATGGTGTAGGATACACACAGAGCTGGACTCCTACAGCGAGCGAACAATCTACACTATATGGTATACTAAATAATGTAATCAGCAAATCAGCAACCGTGAGAGTGTATACATACTATAATGGGGTTAGAGTAGGGTCAACAGACTACGGGATGACGTATTATGTTCGGTCTAGTAACAATAAACCTACGTTTACAGACGCAGGTATATTCTATACTGACACAAACCCGACTACGCTAAACATTACAGCAGATGACCAATATATCATTCAAGGGGTGTCTACTTTAAGCGTAGAGATACCTGTAGAATCAAAAGCCGTAGCTGTTAACGGAGCTACAATGAAATCATACTCTATAACAGTTAACGGCGAGACTAAAAATGTAGCGTACTCCTCAACAAGTACAGTACACGCAGACTTCGGTACGATTAACTCTGCGTCTAATGCAACAATAAGCATTAAAGCGATTGACAGCCGGGGTCTTAGTACAGCGGTAACGAAGACAGTAAAAGTTGTCCCTTATGCGTATCCTTCTGTGACTACTACAGCTAAACGTACAAATGGGTATGAGAGGACAACAACTTTGACTCTCCGAGGAGGATTATCCCCTATCGCAGTCAATGGTTCCAACAGAAACGCCCTAGAGTCCGCAAGGTATCGTTACAAGTTGACAGATGCCACCACCTACGGAAGCTGGAATAACTTTACAGTTACTGGATTCCCTTCCTACTCTGCAACAAACGTACCTCTGGACTTGGATGAGAATGAGACTTGGGATGTGCAGGTAGAAGTATCCGACTCTTTAGGAGTCACAACAAAAACGATATCTGTATCCGCAGGTAGACCAATTATGTTCCTAGATGCCCAACGAAAGGCAGTAGGTATCGGAGACTTCCCTTCCAATGAGTATGAACTGAAGATCAATGGTCGTATTGTATTTGGAGAGACATTTTGGGCTTCTGATAAAGGAGAAGGTTTCGGGGCTATTGACCTTAATAACTCCGACATCTCTAACGCTAACGGCATTTATTTTGCAGACGTAGCACAAAACATGAACGGTGAGGGCTTAATGTTCTCCAAGTCAGGAGCTCAATACGGTTCAAAGGACCTTAACGATTACGATAACCTGATGGTGCGGGATGGTGTTTTGTATTTAAACGCCGCAGGATCAGAGATGAAGTTAGGGAACCACCTACAGATGCAAAACTACGACATTCGTAATGTTAACCATATCACCATTAATGACCCCGGAGGAAACGAGGGCATTGAGTGGTTAGGCGGCAGTGGATGGAAGATTGTAGAGGCACCGAATAACCTGTCTAATACTGGAGGTCCCTTACAGTTTGCTACAGGGGATACTAGAAAGGCGACTATATCTACAACAGGCAACATCTACATCGCTGGGAATGTATTCAGAGGAGAGTCAGGAGGATACACTTATTTTGCAAGTCAAGCACAGGCTTGCCTCATCAGTGATGCTCCCGGAGGTGCTTCAATACGAGTACATGTAGACGGTAAAGGAGGTCGTGTATGGTCCAACGATATTTACAACCGTACGTACAGTGGTTCTGCGAACATGCATGTTACGCCTGACGGTACATTGGGCAGAATAAGCTCATCAGCCAAGTACAAAATGGAAATTAAAGATATAGATACTGAAACACTGGCAGACCGTATACTCAAATTAAAACCTAAGTCTTGGTATGACAAAGCTGTTGTTGAAGCGCTTGTCAATAAGTTAGGTACCTCTATGAGTGATGAAGAATCTGGGGAGGAGATAGAGGAAGACATCCCGTACCTCGAAAGATACTACGGATTTATTGCGGAGGACTTAGTAGAAGTGGGCCTAGAAATGTTCGCTACCTATGGTAGGGCGGATGAGAACGGGAATCGAGAACTAGAGGGTATTGCGTATGACCGCTTGTGGATACTATTAGTCCCTTTAGTGGGTAAGCAGCGAAAACAGATTGAAGAGTTAAAAGCCAGACTAGATCAATTAGAGCAAACCAAATAG
Genome Context
Genome Context
Tertiary structure
PDB ID
5f448dd0cb037875e4467cfa3d7f0f90fe1ef8965e31cb0195f571c9a4b9430b
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Complete nucleotide sequence of Bacillus phage BSP21 | Ghosh,K. and Kim,K.-P. | 2018-12-01 | — | GenBank |