Protein

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Genbank accession
YP_012360071.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,91
Protein sequence
MPKDIQMRERVNGSSWDDMNPLTKSRNVTNEYGITEDKLNGMTPSRMDLYVSATRGVDSPTRGTEANPFKSIQYAVDSIPKYVNNDWYIWIEDGEYDEEIRIKGFTGSALVLGRKDGIIDPFDGSTGLEVTAVEVMDCTGLVRINNFTQLRANCIKKEAYIRASRCAYVTVHAIRADDPTIIMDTVQFDGSTGSVNRSFFNGQVYCIVAKNGSSVRIDSTCQHGTTQSGTGVLSQAATVSLNGTNDWTSGTGNEYATSQGGTINSQLDVLDLTPLLKNGWTAYDQNRNMPRALRHNGVVYLQGLINLGSVGQGVVAFTLPRLWTPQFNSRLYSPLCADGSNSRVLITVGGDVAVEQASGQYISLNDIPPFYVGF
Physico‐chemical
properties
protein length:374 AA
molecular weight: 40913,28840 Da
isoelectric point:5,11764
aromaticity:0,08556
hydropathy:-0,29947

Domains

Domains [InterPro]
DC_0614
ATT
2–370
DC_0614
G3DSA:3.30.1910.20
RBD
46–110
G3DSA:3.30.1910.20
IPR011050
STR
46–261
IPR011050
YP_012360071.1
1 374
Architecture
ATT
ATT 2-370 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_012360071.1
1 374
Domain Start End Length (AA) Confidence
N-terminal 1 83 83 0,8003
Central domain 84 282 200 0,8566
C-terminal 283 374 91 0,9989
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-83
Central
84-282
C-terminal
283-374

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage vB_BaeroP_SYYB1
[NCBI] 		2980552 Uroviricota > Caudoviricetes > Salasmaviridae > Gaunavirus > Gaunavirus syybuna
Host Lysinibacillus fusiformis
[NCBI] 		28031 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_012360071.1 [NCBI]
Genbank nucleotide accession
NC_108593.1 [NCBI]
CDS location
range 12665 -> 13789
strand +
CDS
ATGCCAAAAGACATCCAAATGAGGGAACGTGTTAATGGTAGTTCATGGGATGACATGAACCCTCTCACTAAATCAAGAAACGTCACCAATGAATATGGTATCACAGAAGACAAGCTTAACGGTATGACTCCATCAAGAATGGATTTATATGTGAGTGCTACTCGTGGTGTTGACTCTCCTACTCGTGGCACAGAAGCAAACCCTTTTAAATCAATTCAATATGCTGTGGATTCAATTCCTAAATATGTAAACAATGACTGGTACATCTGGATTGAAGACGGTGAGTATGATGAGGAAATCAGAATCAAAGGGTTCACAGGATCAGCTTTAGTGCTTGGTAGAAAAGATGGGATCATTGATCCGTTTGATGGTAGCACAGGTTTAGAAGTAACTGCTGTAGAAGTCATGGACTGTACTGGCCTTGTCAGAATCAACAACTTCACTCAATTAAGAGCTAACTGTATTAAAAAGGAAGCATACATTAGAGCTTCTAGATGTGCTTATGTGACTGTTCATGCTATTAGAGCAGACGATCCTACAATCATTATGGACACTGTTCAATTTGATGGTTCAACTGGTTCTGTCAACAGATCATTCTTTAATGGTCAAGTGTATTGCATTGTAGCTAAAAATGGATCATCAGTTCGCATTGACTCAACATGTCAACACGGCACAACACAGTCTGGAACAGGTGTATTATCTCAAGCGGCGACTGTTAGTCTTAATGGAACAAACGATTGGACTTCTGGTACAGGCAACGAATACGCAACAAGCCAAGGTGGAACAATCAACAGTCAGTTAGATGTCCTTGATTTAACACCACTTCTTAAGAATGGTTGGACGGCTTACGATCAAAATAGAAACATGCCGAGAGCTTTACGTCATAACGGGGTTGTTTATCTACAAGGGTTAATTAACCTTGGTTCAGTAGGACAAGGTGTAGTAGCTTTCACATTGCCAAGATTATGGACTCCTCAATTTAACTCACGATTATATTCACCATTGTGTGCAGATGGATCTAATTCTAGGGTTCTAATCACAGTCGGCGGGGATGTTGCTGTAGAACAGGCTAGTGGACAGTATATTTCACTTAACGATATCCCTCCATTCTATGTAGGTTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7c9b250d34e75fbcd52daf7c8f06d0798c71c1a79f960e4f06793de9b8011cd3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8156
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50