Protein

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Genbank accession
YP_010090963.1 [GenBank]
Protein name
long tail fiber protein proximal connector
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MSNIMAGFGNGFVETQIISENNAVRYKLSIAAGLKKSVPAIGYVLLQDKPLGPQESPPGLTVREFNVATNTIASSKLFEFKNGEAGGASQAFVDYITALSSKPNVIVILTSGDRLYSNAAIDTWFLNASATSWPGTWRCSKFPCSYVAFYSPLYKKIVQEHATYSDDILRQEDVRAQLEIVYDKFNDIGATGFSKRSIEDPTEYSSSTEFDFVRYPIGAPIIAPMADYSLRAGSKVKVSFELYASADLLATGQTVRISFRWFKDTAILTSQTNEVALGQADRWIKYERVLDVPATADGFTIIVSRYPRQPEPGLGAIKNLIMTEVSRQDEALTRPAEFGVNGIRMNKAIDGTVSELLILADTSDDPSGQVESVEFRELKKDV
Physico‐chemical
properties
protein length:382 AA
molecular weight: 42035,03260 Da
isoelectric point:5,09894
aromaticity:0,10209
hydropathy:-0,14817

Domains

Domains [InterPro]
DC_0912
STR
1–382
DC_0912
PS52031
LEC
22–197
PS52031
YP_010090963.1
1 382
Architecture
STR
STR 1-382
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010090963.1
1 382
Domain Start End Length (AA) Confidence
N-terminal 1 174 174 0,5024
Central domain 175 371 198 0,3704
C-terminal 372 382 10 0,2347
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-174
Central
175-371
C-terminal
372-382

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EcS1
[NCBI] 		2083276 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Kagamiyamavirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010090963.1 [NCBI]
Genbank nucleotide accession
NC_055721 [NCBI]
CDS location
range 159355 -> 160503
strand +
CDS
ATGTCTAATATTATGGCTGGTTTCGGTAATGGATTTGTCGAAACCCAAATCATATCAGAAAATAATGCTGTAAGATATAAACTGTCAATAGCGGCCGGACTTAAAAAGTCCGTGCCTGCTATAGGTTATGTTTTATTGCAAGATAAACCGTTAGGCCCGCAAGAGAGTCCTCCTGGATTAACCGTTAGAGAATTTAATGTTGCAACAAATACAATTGCATCATCTAAATTATTTGAATTTAAAAATGGTGAAGCAGGCGGAGCTTCTCAAGCATTTGTGGATTATATTACGGCCTTATCTTCTAAACCTAATGTAATTGTTATTCTTACATCAGGTGATAGATTATATTCTAATGCGGCAATTGATACATGGTTTTTAAATGCATCAGCAACAAGTTGGCCAGGCACATGGAGGTGTTCTAAATTCCCATGCTCTTACGTTGCTTTTTATTCTCCACTTTATAAAAAGATAGTTCAAGAACATGCTACTTATAGCGATGATATTTTAAGACAGGAAGATGTCAGAGCTCAATTAGAAATTGTTTATGATAAGTTCAATGATATAGGCGCTACTGGATTTTCTAAACGTTCTATAGAAGACCCTACTGAATATTCAAGTAGCACTGAGTTTGACTTTGTACGATATCCTATCGGTGCGCCTATTATCGCACCAATGGCTGACTATTCATTGAGAGCTGGTTCAAAGGTAAAGGTATCGTTTGAATTATATGCTTCAGCCGATTTATTAGCTACAGGTCAAACAGTCCGTATTAGTTTTCGTTGGTTTAAAGATACCGCTATTCTTACGTCTCAGACGAATGAGGTGGCACTCGGACAAGCCGATAGATGGATAAAGTACGAACGGGTTCTAGATGTCCCTGCCACCGCTGACGGCTTCACAATCATTGTTTCTAGATATCCTCGACAACCTGAACCTGGGCTTGGAGCTATCAAGAATTTAATTATGACAGAAGTCTCAAGACAAGATGAAGCATTAACTCGTCCTGCTGAATTTGGTGTCAATGGTATAAGAATGAACAAAGCTATAGATGGAACTGTGTCTGAATTGTTGATTCTTGCTGATACTAGCGATGATCCGTCAGGACAAGTTGAATCAGTTGAGTTCAGAGAACTTAAGAAAGATGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
537002d98356b167d79b68505cfceef64c2e04f85cdd0b848fd939cc8d350b8d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6349
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Full genome sequencing of a novel polyvalent bacteriophage as one of T4-Family member Kawasaki,T., Saad,A.M. and Yamada,T. 2018-07-28 — GenBank