Protein

View in Explore
Genbank accession
QIG77910.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MTSKNTLLAGRASIPISDPSRNKIINGDFRIWQRATSQTTADYGSDDRWANTHVGSTKTHSQQPFTVGQTEVPGEPIYFSRTVVTSVAGAGNYVLKHQKIENVRTLVGKRATITFYAKADSAKNIAVDLVQVFGTGGSPSSNVDFAPKKVLLSTSWQKFSYTVNIPSISGKTLGSNPDNYLGLRFWFDAGSNWNANTVSLGQQSGTFDIARVSLVEGDATSESDPFYERPLITETLLCYRYYIKYPVTVGNAGNYTVHITPTPMRTVPSISWIGTAANGNTQVFATGDVLYSFGYKYVCIQLRCGVVMLSHFKNNIFEIYYAFSSTVKNADTSPAIICSIMSGYLWAISLALPGQTMSPDRPVYGLMSSILSEIQWVLLFFFLASIQLWRFYRVSSKKTFKFELLIKFFSCAVWTFVSLSCISSKYPPAAAVMDTAIVMVAAWWDFLRFDKNKIDKSVGE
Physico‐chemical
properties
protein length:460 AA
molecular weight: 51008,62170 Da
isoelectric point:9,20932
aromaticity:0,13043
hydropathy:0,00348

Domains

Domains [InterPro]
DC_0568
STR
2–352
DC_0568
IPR008979
STR
24–216
IPR008979
G3DSA:2.60.120.260
STR
81–235
G3DSA:2.60.120.260
QIG77910.1
1 460
Architecture
STR
STR 2-352 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG77910.1
1 460
Domain Start End Length (AA) Confidence
N-terminal 1 286 286 0,1262
Central domain 287 449 164 0,3465
C-terminal 450 460 10 0,7156
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-286
Central
287-449
C-terminal
450-460

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_TM61
[NCBI] 		2509572 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG77910.1 [NCBI]
Genbank nucleotide accession
MN988561.1 [NCBI]
CDS location
range 172278 -> 173660
strand -
CDS
ATGACTAGTAAAAATACATTATTAGCAGGTCGAGCTAGTATACCGATCTCAGATCCATCAAGAAATAAAATTATTAATGGTGATTTTAGAATCTGGCAACGTGCTACTTCTCAGACAACTGCAGACTATGGATCTGACGATAGATGGGCTAATACTCATGTAGGATCAACAAAGACTCATTCGCAGCAACCATTTACAGTAGGTCAGACTGAAGTACCTGGCGAACCGATTTACTTCTCAAGAACAGTAGTAACATCAGTTGCAGGTGCAGGAAATTATGTATTAAAGCATCAAAAGATTGAAAATGTACGAACGCTCGTCGGAAAGAGAGCTACTATTACATTTTATGCTAAGGCTGACTCAGCTAAAAATATTGCTGTAGATCTAGTTCAAGTATTCGGTACTGGTGGATCTCCCTCATCGAATGTTGATTTTGCTCCTAAGAAAGTTCTTCTGAGTACTAGCTGGCAGAAATTCTCGTATACTGTTAATATCCCGTCGATCAGCGGTAAAACTTTAGGATCGAATCCTGATAATTATTTAGGGTTAAGATTTTGGTTCGATGCAGGATCAAATTGGAACGCGAATACTGTCAGCTTAGGTCAACAGTCAGGGACATTCGATATCGCTAGAGTATCTCTAGTTGAAGGTGATGCCACAAGTGAGTCGGATCCATTCTATGAGCGTCCACTTATAACTGAAACTTTGCTCTGCTACAGATACTATATAAAATATCCTGTAACTGTTGGTAATGCTGGAAACTATACAGTCCATATCACGCCAACTCCAATGAGAACAGTTCCATCGATTTCATGGATTGGTACGGCTGCAAATGGAAATACACAAGTATTCGCGACTGGGGATGTACTTTACTCATTCGGTTACAAATACGTTTGCATTCAGCTTAGATGCGGAGTTGTGATGTTAAGCCATTTTAAAAATAATATATTTGAGATATATTATGCATTCTCATCAACAGTTAAAAATGCTGACACAAGTCCTGCCATAATCTGTTCGATTATGTCAGGATATCTCTGGGCAATTTCATTAGCTTTACCTGGACAGACAATGAGTCCTGACAGACCTGTCTACGGATTAATGAGTTCTATCCTGTCTGAGATTCAATGGGTATTGCTATTCTTCTTTCTCGCATCGATTCAATTGTGGAGATTTTATCGTGTATCGAGTAAGAAGACATTCAAATTTGAACTCCTCATCAAATTCTTTTCATGTGCAGTATGGACATTTGTATCTCTATCCTGTATCAGCTCTAAATATCCTCCAGCTGCTGCAGTAATGGATACTGCAATTGTTATGGTTGCTGCTTGGTGGGACTTCTTAAGATTTGATAAAAATAAAATCGATAAATCTGTTGGAGAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
1938cd47f10524ecebb70083449b590799e43140a7d205c906617386fab369b1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6612
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank