Protein

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UniProt accession
M1U9J4 [UniProt]
Protein name
OMP1 protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLLAAGSAANAGGLTHKLSSSVQLTVDAAATNVQRVGNSYTVSGNNVGTSYTGTGQGASAVTNGIGQLDISSGVSSLGTVQATQATAGESFSFSQVYTQGDTIVTSAPSVGAVSAYSNQTSTASGSAGDLAGTIDSSGTLAITAGGAGTSAVGQFVSEISILN
Physico‐chemical
properties
protein length:163 AA
molecular weight: 15577,64800 Da
isoelectric point:4,08697
aromaticity:0,04294
hydropathy:0,20307

Domains

Domains [InterPro]
IPR046285
STR
1–154
IPR046285
M1U9J4
1 163
Architecture
STR
STR 1-154 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
M1U9J4
1 163
Domain Start End Length (AA) Confidence
N-terminal 1 161 161 0,8768
Central domain 162 161 1 0,2790
C-terminal 162 163 1 0,6846
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-161
Central
162-161
C-terminal
162-163

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SSM4
[NCBI] 		536466 Uroviricota > Caudoviricetes > Pantevenvirales > Greenvirus > Greenvirus ssm4
Host Synechococcus sp. WH 8018
[NCBI] 		166322 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
391dd9dfe349e3c02df281341128e68a3c6fb321b04bab01b27ae0dd9674ace9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4209
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50