Protein

View in Explore
Genbank accession
XAO15126.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,53
Protein sequence
MGGAAQRLRMGIPFWMSNMIGRSVEVIHTLGADHNFNGQWFRDRCFEAGSAPIVFNITGDLVSYSKDVPLFFMYGDTPNEYVQLNIHGVTMYGRGGNGGSNSPGSAGGHCIQNDIGGRLRINNGGAIAGGGGGGGGGNRGKLIFGGGGGCPFGAGGSSSHMSSGATAGTISAPGKGSVGEGSLSAYTGGAGGNVGAAGGRCNTQGNGTEYNGGAAGKAVTGNAPTWTKVGTIYGSRV
Physico‐chemical
properties
protein length:237 AA
molecular weight: 23461,68310 Da
isoelectric point:9,18128
aromaticity:0,08017
hydropathy:-0,20759

Domains

Domains [InterPro]
IPR048291
ATT
1–20
IPR048291 IPR007932
DC_1679
STR
1–178
DC_1679
XAO15126.1
1 237
Architecture
ATT
STR
RBD
ATT 1-20 | STR 21-178 | RBD 179-237
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage FL18
[NCBI] 		3128055 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli str. K-12 substr. MG1655
[NCBI] 		511145 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAO15126.1 [NCBI]
Genbank nucleotide accession
PP400780.1 [NCBI]
CDS location
range 157533 -> 158246
strand -
CDS
ATGGGTGGTGCCGCACAGAGATTGAGAATGGGAATTCCGTTTTGGATGAGTAATATGATAGGTCGATCTGTTGAAGTAATTCACACACTTGGAGCAGACCATAACTTCAATGGTCAATGGTTCCGAGATAGATGTTTTGAGGCAGGTAGTGCACCTATAGTGTTTAATATCACTGGAGATTTAGTATCATATTCTAAAGATGTTCCTTTATTCTTCATGTACGGAGATACACCAAATGAATATGTTCAGTTAAATATACATGGCGTAACAATGTATGGTCGTGGAGGTAATGGTGGTAGCAATAGTCCTGGCTCAGCTGGGGGTCATTGTATTCAAAACGATATTGGTGGGAGACTAAGAATTAATAATGGCGGAGCTATTGCAGGCGGCGGCGGCGGCGGTGGCGGCGGTAACAGGGGTAAACTAATATTTGGCGGTGGCGGTGGGTGCCCATTCGGTGCTGGTGGGTCTTCCTCTCATATGAGTTCCGGTGCAACTGCTGGTACTATTTCCGCTCCTGGTAAAGGATCTGTTGGTGAGGGGTCTCTTAGTGCATATACAGGCGGTGCGGGCGGTAACGTTGGTGCTGCTGGAGGAAGATGTAATACTCAAGGTAACGGTACAGAATATAACGGCGGCGCAGCAGGTAAAGCTGTTACCGGAAATGCCCCAACATGGACTAAGGTTGGTACAATATACGGTTCAAGAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
792ff4e76040eeb0234253b5f912cacd235037c8ddc4dbd6f0b334f6b865f4f6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9268
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Gp38 adhesins of Straboviridae phages target specific extracellular receptor loops Lutz,V.T., De Sousa,V.K., Taylor,N.M.I., Nugen,S.R., Gambino,M. and Brondsted,L. 2025-04-25 — GenBank