Phage RBP Database

Genbank accession

QBQ74977.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

Protein sequence

MAQNTNLNVTPYYDDFDKTKNFYRVLYRPGYPIQARELTTSQSILQHQVEQVGSHLFKDGAMVIPGQVGYDLTVDAIMLQESFLGANIEDYRSQLNGRIITGLSTGVKAKVLYSIGAAESEKGYITLYVKYIESGGEQNNQQTFQNNEQLVTDAEITFGTTLIEIGSPFAQLLPTDALQQGSVAYVQDGVYFIRGFFVDVPYQYILLNQYDTNPQYRVGLEILESIVTPEDDASLNDNAAGTSNYAAPGSHRFRITTKLSKKVLTDDADKDFIELLRINGRKIEKIVDRTAYDELEKSLATRTYEESGDYVVKDFGLRLRDNLNDGFNNGVYAAGATTSSGVTASESLFSLEVSPGVAYVRGYRVKTLSPTYVDVDKPRETLEAANVIIPFEMGNYSLVDNIFGFLNISGSSVTNSYQVLELRDRFTATPGVSVGNLIGYARVSSFEYVENPDNTFGNTDDRYKLNLFDVQMLTVIKLDSAVSITQGSILKGASSGATAYIVDTVASATTFNVYQTQGTFLAGEMLTLDGRNLDTIDSVYTYKYSDARQLLARDEVSNTVEFTGDIVIDDAARVRGDAFTYDATGGSEIITGLNSDFASDLRPGDRIYFSATEYVDVDYIDPTNLTTGGPGSIFNYSNQTVNVTPPGSNFPSAGTYTTIVRYRAKLADIENANLLSPMPKKYIKSISDESMTVRRTFDAQTVSSNSISITLPENEQFISLSQTAYNITVQGSTDPTYTVGSQIPVNTTNSGSIGYATFTSNDRTTLQIDNLTNITSVKVTASVSKNVTTRKTKASTEMFVLKVDKTTENLDKQNYGLAYTHIYGTRIQDREISLGFTDCYRLHAVYESLDNNDPVIPSVTLVEPIFFAKNTIVTGKSSGARAKVVEFASGNLKLSVVYISGRFAAGETITGFDSNGNPLTAIINDSENSIVAGSKVVTDNYYLEVAQTGFIYDTSRIVRKKGASVPTRKLKIVADFYTHSSTGDYFGGQSYLNTTYDQIPFFKFSFLADYLDFRPGAKNLYTGAGTVASPARVECSTFDFKSRVFTSGGTVNATIFDIPKINSDFRCDFDWYLPRVDKVYVLPNGQFQIVKGKSAEEPQEPDDLADGMLLGTLYHKPYGFNPEDDTVIKRSDNKRYTMRDIGSIERRLDQVEYYTSLNMLESDTFNTQILDASGKNRFKNGFLVDDFSDHSKSAVDDEDFNASIDYRNGQCRASHYTTNVSLVINEGLSTGYQKTGPIISLPYTELKIVDQPYASRVENVNPFNVFTYIGRIDLTPASDDWVDTNRAPQRVTQIEGDFQQVSDELNADQNGFAPIEWASWTTNWSSERTISSTVTRNSGWLAEDRGRSPNAWVWGGRGMRRVNRTSTIEVRSSQTRQGIRTRVVPRIDRQSLGDSIISQTAIPWIRSRNIAADVVRLKPRTQFYTYFDGQKVDGYITPKIIELIKDPTVDTRTNSTPFVIGETVRGLTSGAVLKVAAPNDKFTFNPYDDSDLPESYASTTNFLNIDIQALAAQAVGDFYGNIQVGEILVGDSGARAVVGNRRIISDRLGQFSGSFFIPSPREDSNPRWATGSRTLRFSTSETDSRLAGAVASSAETTYEARGQLNTVQENVLAVRNADVVRDTVTQERSINTTRTETRQIGWYDPLAQSFIVDEEGGVFLTSVDVYFNSKDDNIPISMQIRTMENGYPTTTILPFSDVTLNPSAVQLSEVGAIATKFTFRAPVYIPQSVEHCFVLLSDSNSYQVWISRMGELDITGDRTISEQPYAGVLFKSQNASTWTADQYEDLKFSIYRAQFETATNGRLVLNNSTLGVGNGGVVSLRRDPIETITPLLTILLNSTTLPYTIGARVYQKTTLAQGTIQEVETLVNGVAITLSDVTGTFQSGSESGGVVVNRIVSSKTVATMTVNTITGGTGAFTVGETITGNSANAPTATVTAWDSGTSTLTLESVSTNFTVSTETINGGTSDTTATVATVTYSGDAVETGTISSAFPATGITPAYTSDQRKITLYHSNHGMHDLNNNVTITGIVSEISPTFLTTSISDSDTSISVNDASAFHTRVDGATVGIGNPGFIKIGDEIISYSAISNDGKTITVLNRGEDNTTAASHADETVVECYNLDGIPLTEINKIHNNIQNPTLDSYQIGVSSLGNVGIRGGGESATATQNIQFEVVRPQVQRMILPKTEVTARINTINGTSINDGSTNLTGSFSNDGTFTDILLNEDNYLTKPKLICSQINESEELSGEKSFRMDLTLQTSEDNVSPIIDTDRMSLILVSNRINNPANSDSSKLANGDEHEAVYITRVASLTNPSSSIKVIFSAYRPAGSTIRVLYRIRPVGSTDPIETFGYDYFDANLSSVPASTESQLYKEYSYEIGGLSFDQYQVKVVMVSPNQAYSPIIQDFRAIALAL

Physico‐chemical properties

protein length:	2407 AA
molecular weight:	263802,71980 Da
isoelectric point:	4,78098
aromaticity:	0,09306
hydropathy:	-0,28180

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR032096	STR	DC_0487	12	66	InterPro cluster	Domain of unknown function DUF4815	Central	Low	Positional only	116 proteins / 218 hits
DC_0414	STR	DC_0414	80	1296	Novel HMM	DC_0414	Central	Low	Positional only	88 proteins / 88 hits
IPR032096	STR	DC_0487	182	382	InterPro cluster	Domain of unknown function DUF4815	Central	Low	Positional only	116 proteins / 218 hits
IPR032096	STR	DC_0487	1059	1286	InterPro cluster	Domain of unknown function DUF4815	Central	Low	Positional only	116 proteins / 218 hits
DC_0082	RBD	DC_0082	1285	2407	Novel HMM	DC_0082	C-terminal	Low	Positional only	104 proteins / 104 hits

	Name	Taxonomy ID	Lineage
Phage	Cyanophage S-RIM4 [NCBI]	2530169	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Synechococcus [NCBI]	1129	cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Genbank protein accession

QBQ74977.1 [NCBI]

Genbank nucleotide accession

MK493321.1 [NCBI]

CDS location

range 77762 -> 84985
strand +

CDS

ATGGCACAAAATACCAACCTAAACGTCACACCTTACTACGACGATTTCGATAAAACTAAAAACTTTTATCGAGTGTTGTATCGCCCTGGATACCCGATTCAGGCGAGAGAGCTTACAACGTCACAGTCGATTCTGCAGCATCAGGTCGAGCAAGTAGGATCTCACTTATTTAAGGATGGCGCTATGGTCATCCCAGGTCAGGTTGGTTATGACTTGACGGTTGATGCCATTATGCTTCAGGAAAGTTTCCTGGGTGCCAATATTGAAGACTATCGTAGTCAGTTAAATGGTAGAATCATCACAGGTTTGTCTACTGGTGTTAAAGCAAAGGTTTTGTATAGCATCGGCGCTGCAGAATCTGAGAAAGGTTATATCACATTATATGTAAAGTATATTGAGTCTGGTGGAGAGCAAAACAATCAGCAGACTTTCCAAAATAATGAGCAGTTGGTAACCGATGCTGAAATTACCTTTGGCACAACTCTTATTGAAATTGGATCTCCTTTTGCACAATTGCTACCCACAGATGCATTGCAGCAAGGATCTGTCGCCTATGTGCAAGATGGTGTTTACTTCATTAGAGGATTTTTTGTAGACGTACCATATCAATATATTCTTCTAAATCAGTATGATACCAATCCTCAATATAGAGTTGGTCTGGAAATTCTAGAATCTATTGTTACTCCAGAAGATGACGCATCTCTTAATGACAACGCAGCAGGCACATCTAACTATGCTGCTCCTGGATCTCACCGATTTAGAATCACCACAAAACTAAGCAAAAAAGTATTAACTGATGATGCTGATAAAGACTTCATCGAATTACTTCGTATTAATGGTAGAAAGATTGAAAAGATTGTTGATCGCACTGCATATGATGAATTAGAAAAATCTCTTGCTACTAGGACTTACGAAGAGTCTGGTGATTATGTAGTAAAAGATTTTGGTCTTAGACTTAGAGACAACTTAAATGATGGATTTAATAATGGCGTCTATGCTGCTGGAGCGACGACTTCTAGTGGTGTAACCGCTTCCGAATCTCTCTTCTCTTTGGAAGTAAGTCCTGGTGTTGCATATGTTCGTGGTTATAGAGTTAAGACTCTTTCTCCAACATATGTTGATGTCGATAAACCAAGAGAAACTCTAGAAGCGGCAAACGTAATTATTCCATTTGAAATGGGTAATTATTCTTTAGTTGACAACATCTTTGGTTTCTTAAACATTTCTGGATCTTCTGTCACTAATTCTTATCAAGTATTAGAGCTTAGAGATAGATTTACTGCAACTCCTGGTGTTTCTGTTGGCAACCTTATTGGTTATGCTCGCGTTTCTTCTTTTGAATATGTAGAGAATCCTGATAATACATTTGGAAACACTGACGACAGATATAAGTTAAATCTTTTTGATGTCCAAATGCTTACGGTCATCAAATTAGATTCTGCAGTTTCTATTACTCAAGGATCTATTCTTAAGGGTGCTTCTTCTGGAGCAACTGCATATATCGTTGATACTGTTGCTTCTGCAACAACATTCAATGTCTATCAGACTCAGGGGACATTCTTAGCAGGTGAGATGCTAACCCTTGATGGTAGAAATTTAGATACAATTGATTCGGTATATACTTACAAGTATTCTGATGCAAGACAATTACTTGCTAGAGATGAAGTCTCCAATACAGTTGAGTTTACTGGTGATATTGTAATTGACGATGCTGCAAGAGTCCGTGGTGATGCATTTACTTATGACGCCACTGGTGGATCTGAAATTATTACTGGTTTGAATTCTGATTTTGCCTCAGACTTACGTCCTGGAGACAGAATTTATTTCTCCGCAACAGAATATGTTGATGTTGATTACATTGATCCAACTAATCTGACCACTGGTGGTCCTGGATCGATCTTTAATTATAGTAATCAGACCGTCAATGTAACTCCACCAGGAAGCAATTTCCCATCGGCAGGCACATATACTACTATTGTTAGATATCGTGCAAAACTTGCTGATATTGAAAATGCAAATCTTCTTAGCCCCATGCCTAAGAAGTATATCAAGAGTATTTCTGATGAATCAATGACAGTCAGAAGGACGTTTGATGCACAAACAGTTTCTTCTAACTCGATCTCTATCACTCTTCCAGAGAATGAGCAGTTTATCTCTCTGTCTCAAACTGCTTATAATATCACTGTGCAGGGTAGCACCGACCCAACATATACTGTTGGATCTCAAATCCCTGTCAATACAACCAATAGTGGATCTATTGGTTATGCAACCTTTACAAGTAATGATAGGACAACCCTTCAGATTGACAACCTTACCAACATTACTTCTGTTAAGGTAACTGCTTCCGTTTCTAAAAACGTCACAACCAGAAAGACTAAGGCATCCACAGAGATGTTTGTCTTAAAAGTTGATAAGACAACCGAGAATCTAGACAAGCAAAACTATGGTCTGGCATATACTCACATCTATGGCACCAGAATTCAAGATAGAGAAATTTCTCTTGGATTTACAGATTGTTATAGACTACATGCAGTATATGAATCTCTAGATAACAACGATCCTGTTATTCCAAGTGTAACTCTTGTTGAGCCAATCTTCTTTGCCAAGAATACTATTGTTACTGGCAAATCTTCTGGTGCAAGAGCAAAAGTTGTTGAGTTTGCTTCTGGTAATCTAAAACTTAGTGTTGTTTACATCTCTGGCAGATTTGCTGCTGGTGAAACCATCACTGGATTTGATTCCAATGGTAATCCACTAACAGCAATTATTAATGATAGTGAAAATTCTATCGTTGCTGGATCGAAAGTAGTTACAGACAACTACTATTTGGAAGTTGCACAGACTGGATTTATTTACGATACATCCAGAATTGTCCGCAAAAAAGGTGCATCAGTCCCAACTAGAAAACTGAAGATCGTTGCTGACTTCTATACTCACTCTTCTACTGGTGATTACTTTGGTGGTCAGTCTTATTTGAATACGACATATGATCAAATTCCTTTCTTCAAGTTTAGCTTCCTTGCAGACTACTTAGACTTCCGTCCTGGTGCTAAGAATCTCTACACTGGTGCTGGCACAGTTGCTTCACCTGCTCGTGTTGAGTGCTCTACGTTTGACTTTAAGTCAAGAGTATTTACTTCTGGTGGCACAGTCAATGCAACAATCTTCGATATTCCCAAGATCAATAGTGATTTCCGTTGTGACTTTGACTGGTATCTTCCTAGGGTTGACAAGGTTTATGTGCTCCCTAATGGTCAATTCCAAATTGTTAAGGGTAAGTCTGCAGAAGAACCACAAGAGCCTGACGATTTAGCGGATGGTATGCTTCTGGGCACGTTATACCACAAACCATATGGTTTTAATCCAGAAGATGATACTGTTATCAAGAGATCTGATAATAAGCGTTATACAATGAGAGATATTGGATCTATTGAGCGTCGTCTCGATCAGGTCGAGTATTATACATCTCTCAATATGCTTGAGTCGGATACTTTTAATACTCAAATTCTTGATGCTTCTGGTAAGAATAGATTTAAGAATGGTTTCCTTGTAGATGATTTCAGCGATCATAGTAAATCTGCTGTAGACGATGAAGACTTTAACGCCTCTATTGACTATAGGAATGGTCAGTGCCGAGCTTCTCACTACACAACAAACGTTTCTCTTGTTATCAATGAGGGTCTTTCAACAGGTTATCAAAAGACTGGTCCAATCATTTCTCTTCCATACACCGAATTGAAGATTGTTGATCAACCTTATGCATCTAGAGTTGAGAATGTCAACCCATTCAACGTATTCACTTATATTGGTCGTATTGATCTAACTCCCGCATCTGATGACTGGGTTGACACAAATCGTGCTCCTCAAAGAGTTACTCAGATCGAAGGTGACTTCCAGCAGGTTTCTGATGAATTAAATGCCGACCAAAATGGTTTTGCTCCTATTGAATGGGCATCTTGGACAACTAACTGGTCTAGTGAGAGAACCATTTCTTCTACAGTTACAAGAAACTCTGGGTGGTTGGCAGAAGACCGTGGTCGTTCTCCTAATGCTTGGGTTTGGGGCGGTCGTGGTATGCGTCGTGTCAATCGCACATCTACTATTGAAGTAAGAAGTAGTCAAACCAGACAAGGTATTAGGACTCGCGTTGTCCCCAGAATTGACAGACAGTCTCTGGGTGACAGCATCATTTCCCAAACTGCTATTCCTTGGATTAGATCCAGAAATATTGCGGCAGATGTTGTTAGATTGAAGCCCAGGACTCAATTCTACACATATTTTGATGGACAAAAGGTTGATGGATACATCACACCCAAGATTATTGAATTGATCAAAGATCCAACTGTTGATACTAGGACAAACTCCACTCCATTTGTGATTGGCGAAACAGTTAGAGGTTTGACTAGTGGTGCTGTCCTCAAGGTTGCTGCACCTAATGATAAGTTTACTTTCAATCCATATGATGATAGTGATTTGCCTGAGTCCTATGCATCGACTACAAACTTCCTAAACATCGATATTCAAGCACTGGCAGCTCAGGCAGTTGGTGACTTCTATGGTAATATCCAAGTTGGTGAAATTTTAGTCGGTGATTCGGGTGCAAGAGCGGTTGTCGGTAATAGAAGAATTATCAGTGACAGATTAGGTCAGTTTAGTGGATCTTTCTTCATTCCTTCCCCAAGAGAAGATAGTAATCCTCGCTGGGCAACTGGATCAAGAACTCTTAGATTCTCTACTTCGGAAACTGACTCTCGTCTTGCTGGCGCTGTTGCATCTTCTGCAGAAACAACATATGAAGCAAGAGGTCAACTCAATACGGTTCAAGAAAATGTCTTAGCAGTCCGTAATGCAGATGTTGTTAGAGATACTGTAACTCAGGAAAGATCTATTAACACAACCAGAACTGAAACACGTCAGATTGGTTGGTATGACCCTCTAGCGCAATCCTTTATTGTTGATGAAGAGGGTGGTGTCTTCTTAACATCGGTTGATGTATATTTCAACTCTAAGGATGACAATATCCCCATCTCCATGCAGATCAGGACAATGGAAAATGGTTATCCCACAACCACCATTCTTCCTTTCTCTGATGTAACTCTGAATCCTTCTGCTGTCCAGTTATCGGAAGTTGGTGCAATTGCAACTAAGTTTACGTTTAGAGCACCTGTTTATATTCCTCAGTCTGTGGAGCATTGCTTCGTCCTTCTTTCCGACTCCAACTCTTATCAAGTTTGGATTTCCAGAATGGGTGAATTGGATATTACTGGTGACCGCACCATTTCGGAGCAACCCTATGCTGGTGTCTTATTCAAGTCACAAAACGCATCCACTTGGACTGCTGACCAGTATGAAGATCTCAAATTCTCTATCTATAGAGCACAGTTTGAGACTGCTACAAATGGCAGATTGGTCTTGAATAACTCCACTCTTGGTGTTGGTAATGGTGGTGTTGTTTCTCTAAGAAGAGATCCTATTGAAACAATTACTCCACTTCTGACAATACTTCTCAACTCCACAACACTTCCATATACGATTGGTGCTAGAGTCTATCAAAAGACAACTCTTGCACAAGGCACAATTCAGGAAGTAGAAACTTTAGTCAATGGTGTTGCTATCACACTTTCTGATGTTACTGGCACATTCCAGTCTGGATCTGAAAGTGGTGGTGTGGTTGTTAACAGAATTGTTTCTTCCAAGACAGTTGCAACTATGACAGTTAACACCATTACTGGTGGCACAGGTGCATTCACTGTTGGTGAAACAATTACTGGTAATTCTGCTAATGCTCCAACAGCAACAGTAACTGCTTGGGATTCTGGCACTAGCACTCTGACACTTGAGTCTGTTTCTACAAACTTCACCGTTTCCACAGAAACAATCAATGGCGGCACTTCCGATACAACTGCAACAGTTGCAACGGTAACTTACAGTGGAGACGCTGTTGAAACTGGCACTATTTCTTCTGCATTCCCTGCAACTGGTATTACTCCAGCATATACCTCCGATCAAAGAAAGATTACCCTTTATCATTCTAATCATGGTATGCACGATCTCAATAATAATGTCACTATCACTGGCATTGTTTCTGAGATTAGCCCAACATTCTTAACAACATCGATCTCCGATAGCGATACTTCTATCTCTGTCAATGATGCTTCTGCTTTCCATACAAGAGTTGATGGTGCTACAGTTGGCATTGGTAATCCTGGATTTATTAAGATTGGAGATGAAATTATCTCTTACAGTGCAATTTCAAATGATGGAAAGACGATTACCGTCCTGAATCGTGGGGAAGATAACACTACAGCAGCATCCCACGCTGATGAAACTGTTGTTGAATGTTACAACCTTGATGGCATTCCTTTGACGGAAATTAATAAGATTCACAATAATATTCAGAATCCAACTCTAGATAGTTATCAAATTGGTGTTTCTTCTCTAGGAAATGTTGGTATTCGTGGTGGTGGAGAAAGTGCTACTGCAACACAAAACATTCAGTTTGAAGTTGTAAGACCTCAGGTTCAGAGAATGATTCTTCCTAAGACAGAAGTCACTGCAAGAATCAATACCATTAATGGCACATCTATTAATGATGGTTCAACAAATCTGACTGGATCCTTCTCTAATGATGGGACGTTTACTGACATTCTCCTTAACGAAGATAACTATCTCACCAAACCAAAACTAATTTGCTCGCAGATTAATGAATCTGAAGAGTTAAGCGGTGAGAAGTCTTTCAGAATGGATCTGACACTTCAGACTAGTGAAGATAATGTTTCTCCAATTATCGATACTGATAGAATGTCATTGATTCTGGTTTCCAATAGAATCAATAATCCAGCAAATTCGGATTCTTCTAAGTTGGCAAATGGTGATGAGCATGAAGCAGTATACATTACAAGAGTTGCTTCTCTGACTAATCCATCATCTTCTATTAAGGTAATCTTTTCGGCATACCGCCCTGCGGGGTCAACGATTAGAGTCCTATATAGAATACGTCCCGTTGGAAGCACAGATCCAATTGAAACATTTGGATATGATTACTTCGATGCAAATCTAAGTAGTGTGCCTGCTTCTACAGAATCTCAACTCTATAAGGAATATTCTTACGAGATTGGTGGATTGAGCTTTGATCAATATCAGGTTAAAGTCGTCATGGTTTCTCCAAACCAGGCATACTCGCCAATCATTCAGGACTTCCGAGCGATTGCCTTAGCATTATGA

Genome Context

Title	Authors	Date	PMID	Source
Diversity in Cyanophage Genomes from Southern New England Coastal Waters	Marston,M.F.	2013-04-03	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature