Protein

View in Explore
Genbank accession
AKF13690.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MKLYQATISPPTFYRHNQTDEERKALEAEYISKFHVLLGNLKGVTIGTPGERNWEPSTWSNNVPVVCSEIGLGRLTASAWDLDSNYPYSITNLVLLWDDIDPEAALRPMLERLELAASRLAGMSVSYINQPEMVSGIEGWNSLTGSAIPGPNLQNVNRLLLKEDCCTDELQHALDAGWRLLAVCPQEARRPDYILGRFDPTPPSGPRGAARSIEG
Physico‐chemical
properties
protein length:215 AA
molecular weight: 23820,65950 Da
isoelectric point:4,93467
aromaticity:0,07442
hydropathy:-0,33163

Domains

Domains [InterPro]
DC_1703
STR
1–215
DC_1703
AKF13690.1
1 215
Architecture
STR
STR 1-215
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage DL52
[NCBI] 		1640975 Uroviricota > Caudoviricetes > Lindbergviridae > Pbunavirus PB1 >
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AKF13690.1 [NCBI]
Genbank nucleotide accession
KR054028 [NCBI]
CDS location
range 11149 -> 11796
strand +
CDS
ATGAAACTCTACCAGGCCACGATCAGTCCTCCGACCTTCTATCGCCACAACCAGACCGACGAAGAGCGGAAGGCGCTGGAGGCGGAATACATCAGCAAGTTCCACGTTCTCCTGGGGAACCTGAAAGGCGTAACCATTGGAACTCCCGGCGAGCGGAACTGGGAGCCGTCCACTTGGAGCAATAACGTCCCGGTGGTGTGTAGCGAAATCGGCTTAGGTCGCCTGACGGCTTCGGCCTGGGATTTGGATAGTAACTATCCGTACTCCATCACCAATCTGGTTCTGCTCTGGGACGACATTGACCCGGAAGCCGCTCTGCGACCCATGCTGGAGCGTCTGGAGCTGGCCGCAAGCCGGTTGGCCGGTATGTCCGTAAGCTACATCAACCAACCGGAGATGGTGAGCGGAATTGAGGGTTGGAATTCACTCACCGGTTCGGCTATTCCTGGTCCGAACCTCCAGAACGTCAATCGCCTGCTTCTCAAGGAAGACTGCTGCACGGACGAACTCCAGCATGCCCTGGACGCAGGATGGCGCCTTCTCGCCGTCTGTCCGCAGGAAGCGCGTCGGCCCGACTACATTCTGGGTCGATTCGACCCGACTCCACCATCCGGTCCCCGTGGAGCAGCCAGGAGTATAGAAGGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e566be825b406b2aea68a93ae420f924d93abc0be198c272db1bf1f7ae66b1b5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5871
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A novel bacteriophage cocktail reduces and disperses Pseudomonas aeruginosa biofilms under static and flow conditions Alves,D.R., Perez-Esteban,P., Kot,W., Bean,J.E., Arnot,T., Hansen,L.H., Enright,M.C. and Jenkins,A.T. 2016 26347362 GenBank