Protein

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Genbank accession
AAQ17871.1 [GenBank]
Protein name
gp12 short tail fibers
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MRTNNITQHISSKAGSVVFDPASAPAFDTTITDLQKLGNKIDAHATKPLPVASETVSGIAELATVDEVLLGNDKVRLVTPYTLQQKWARPNASDTVYGLVRYNTVAEREEAAAKVDVTVNTASLWDVVRNKSIATESKRGSVSISTLVAAKAGVDDTTAMTPAKVKAAIDTFAVTSVSGATETVTGTVKNSPALITNAALHTGYAVTPKGFIETRAAQARVGTVRMATQAEANARTLGDVAISPATLPIASDTQYGITALLHNAQSGVTNKALSAHGATLFINRNGDSMTGDLTVHNIFTANGQNGRGDSLTRKDYVDGLFNQKANISHTHGTPQESWTLIWQGPLDRGNFVTNQPWWNFDALVIESSRDGGSWFNTMEISRWQIEQMQAKYPNFNLVSAQEYYWFGKFRADGMYFDTHTENCYLWRIYGVNKTWS
Physico‐chemical
properties
protein length:436 AA
molecular weight: 47333,36930 Da
isoelectric point:6,76494
aromaticity:0,08486
hydropathy:-0,27225

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AAQ17871.1
1 436
Domain Start End Length (AA) Confidence
N-terminal 1 286 286 0,9631
Central domain 287 425 140 0,0284
C-terminal 426 436 10 0,9947
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-286
Central
287-425
C-terminal
426-436

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage Aeh1
[NCBI] 		2880362 Uroviricota > Caudoviricetes > Pantevenvirales > Cinqassovirus > Cinqassovirus aeh1
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAQ17871.1 [NCBI]
Genbank nucleotide accession
AY266303 [NCBI]
CDS location
range 139360 -> 140670
strand +
CDS
GTGAGAACAAATAATATCACACAGCATATTAGCTCTAAAGCGGGGTCGGTTGTATTCGACCCCGCATCTGCTCCTGCTTTTGATACGACTATCACAGATCTACAAAAGCTGGGAAATAAAATCGATGCTCATGCAACTAAACCACTACCGGTCGCATCTGAAACTGTATCGGGTATTGCTGAATTGGCTACCGTTGATGAAGTTCTATTGGGAAATGATAAAGTTAGATTAGTCACTCCTTATACACTTCAACAAAAATGGGCGCGTCCTAATGCGAGCGACACCGTTTATGGTCTAGTTAGATATAATACAGTAGCAGAACGAGAAGAAGCGGCAGCGAAAGTTGACGTTACTGTGAATACCGCATCTTTGTGGGACGTTGTTCGTAATAAATCGATTGCAACTGAGTCCAAGCGCGGATCAGTGAGTATTTCAACTCTGGTAGCTGCCAAAGCTGGCGTAGATGATACAACAGCAATGACACCAGCGAAAGTTAAAGCGGCAATCGACACGTTCGCGGTAACTTCTGTATCTGGTGCAACTGAAACCGTTACGGGCACAGTTAAGAATAGTCCGGCATTAATCACTAACGCCGCGCTTCATACCGGTTATGCAGTTACACCTAAAGGTTTCATTGAAACCAGAGCCGCACAGGCTCGCGTTGGAACAGTTCGTATGGCAACTCAAGCAGAAGCTAACGCTAGAACTCTGGGAGACGTGGCAATCAGTCCAGCGACGCTTCCAATCGCATCTGATACACAATATGGCATCACTGCTCTTTTGCATAACGCGCAATCCGGCGTAACAAACAAAGCATTGAGCGCACACGGAGCGACTCTGTTTATCAACAGAAACGGCGACTCCATGACGGGTGATCTTACTGTTCATAATATCTTTACTGCTAACGGACAAAACGGACGTGGCGATTCGCTGACTAGAAAGGATTACGTTGACGGACTTTTCAATCAGAAAGCGAATATTTCGCATACGCACGGAACTCCACAAGAATCATGGACACTAATTTGGCAGGGACCGTTAGATCGCGGTAATTTCGTGACTAATCAGCCATGGTGGAACTTCGATGCACTCGTTATTGAAAGTTCGCGTGATGGTGGTAGCTGGTTTAATACCATGGAGATTAGTCGTTGGCAGATCGAACAGATGCAAGCAAAATATCCAAACTTCAACTTGGTATCGGCACAAGAATATTATTGGTTTGGTAAGTTTAGAGCCGATGGTATGTATTTCGACACCCATACAGAGAACTGCTATCTGTGGAGAATATACGGAGTTAACAAAACTTGGAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
25a73fb0c757aa995df371f853f24f231bf52ec9e3a200bd3a5a7b5b8aadd074
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7344
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The evolution, function and folding of the fibritins of T-even related bacteriophages Letarov,A., Tetart,F., Desplats,C. and Krisch,H.M. 2005-02 — GenBank
Aeromonas hydrophila phage Aeh1 complete genome Petrov,V., Nolan,J., Bertrand,C., Letarov,A.V., Krisch,H.M. and Karam,J.D. 1988-10 — GenBank