Protein

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Genbank accession
YP_009882250.1 [GenBank]
Protein name
baseplate wedge subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MKELVNIGQMVDDGTGDYLREGGIKINNNFTETYDQLGDGKNLHPAGAWQTIEAHKLPNNTLNAVFGKSYAVDTGTSRAVIKLPKGTPADYNKVIRIRDTFSTWQANSVTIEPASGDTLKGGGARVFTTNLTDLELVYCRPNRWEYLPNKLLNKISNGDIATVMKKEFLCTEGQTDFINIFGNSDYNLVNTHVYLRGNLLYYGDDFSADSDYGSPGAAAGQLVPLDARSIRLRVPAAKGDSLMVVTYLDGIAQFRSTYNRLDLSLLDSKLTNEETAPGARLVTDLSSLTSITVEQMGYVFNSNSGLINTETLEVYLNGVILNMAGRAGLPMMYCEGADANNLTDCQLMGGNWTQSHKDYTISVNDNGAITSIEFGRKFEHGDILTIKWYNNNIGTTMEIDDITVITDDMYIARGGEYDITNAVRVTDYSNPVLPNVEPEAPKSVRIQVPGDMFDLLYPIGTIYENAINKANPVTYMGFGVWKLWGMAKVLVGWNDDIQDTQFGLNNNDLDINGQPTHTAGGTGGSRTVSIDNDNLPATATDKEVLVADNDGSVVIGGCQFDPDDSGPAYHKYRQEKATTNISHAPPKPIETLDPYITVYRWMRIA
Physico‐chemical
properties
protein length:605 AA
molecular weight: 66440,58580 Da
isoelectric point:4,69384
aromaticity:0,08760
hydropathy:-0,33537

Domains

Domains [InterPro]
IPR034695
Unmapped
1–605
IPR034695
IPR036240
STR
1–233
IPR036240 IPR054430 IPR053827
DC_2238
STR
1–585
DC_2238
IPR008987
ATT
2–147
IPR008987 IPR056391
G3DSA:1.20.5.960
Unmapped
13–43
G3DSA:1.20.5.960
YP_009882250.1
1 605
Architecture
ATT
STR
ATT
STR
ATT
ATT 1-147 | STR 148-158 | ATT 159-264 | STR 265-451 | ATT 452-604 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009882250.1
1 605
Domain Start End Length (AA) Confidence
N-terminal 1 316 316 0,9365
Central domain 317 515 200 0,4158
C-terminal 516 605 89 0,9918
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-316
Central
317-515
C-terminal
516-605

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage AbTZA1
[NCBI] 		2500827 Uroviricota > Caudoviricetes > Pantevenvirales > Twarogvirinae > Hadassahvirus
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009882250.1 [NCBI]
Genbank nucleotide accession
NC_049445 [NCBI]
CDS location
range 122704 -> 124521
strand -
CDS
ATGAAAGAATTAGTAAATATCGGACAAATGGTTGATGATGGCACTGGAGACTATTTGAGAGAAGGTGGAATAAAGATTAATAATAACTTTACTGAAACCTACGATCAATTAGGCGATGGTAAAAATCTTCACCCTGCTGGAGCTTGGCAGACTATCGAAGCTCATAAATTACCAAATAACACGTTAAATGCAGTGTTCGGAAAATCTTACGCAGTTGATACTGGTACATCTCGTGCTGTTATAAAATTGCCTAAAGGTACACCTGCGGACTACAACAAAGTAATTCGAATTCGAGATACATTTTCGACATGGCAAGCAAACTCTGTTACAATTGAGCCTGCTAGTGGCGACACACTTAAAGGTGGTGGTGCAAGAGTATTCACTACAAATTTAACTGACCTTGAACTTGTGTATTGTCGTCCAAACCGCTGGGAATACCTTCCTAATAAACTCCTTAATAAAATTTCAAATGGCGACATCGCCACTGTGATGAAAAAGGAATTTTTATGTACTGAAGGACAAACAGACTTTATTAATATCTTTGGCAACAGTGATTATAATTTAGTCAATACTCATGTTTATCTTCGAGGTAACCTATTGTATTACGGTGATGACTTTAGCGCAGATTCCGATTATGGGTCACCAGGTGCAGCTGCAGGGCAACTTGTTCCTTTAGACGCAAGAAGCATTAGACTTAGAGTACCTGCAGCCAAAGGCGATTCACTCATGGTTGTTACCTACCTTGATGGTATTGCGCAATTTAGATCAACATATAATCGTTTAGATTTATCTTTACTTGATAGTAAATTAACAAATGAAGAAACTGCTCCTGGTGCTAGACTGGTAACAGATTTAAGTTCTTTGACATCTATTACAGTAGAGCAAATGGGCTATGTCTTTAATAGTAATAGCGGTCTTATCAATACTGAAACACTTGAAGTTTATTTGAATGGTGTTATTTTAAATATGGCCGGGCGTGCAGGTCTTCCAATGATGTATTGTGAAGGCGCAGATGCCAATAATTTAACAGATTGCCAACTTATGGGTGGTAATTGGACTCAATCTCATAAAGATTATACAATTAGTGTTAATGACAACGGCGCAATCACAAGTATTGAATTTGGAAGAAAATTTGAGCATGGCGACATTCTCACAATAAAATGGTACAATAATAATATTGGCACAACAATGGAAATTGACGATATCACTGTTATTACAGATGATATGTATATAGCTCGTGGCGGTGAGTATGATATTACTAATGCAGTTCGAGTTACAGACTACTCAAATCCTGTTCTCCCAAATGTTGAACCAGAAGCTCCCAAATCAGTTCGTATCCAAGTCCCTGGTGATATGTTTGATTTATTGTATCCAATTGGCACCATTTATGAAAATGCAATAAACAAAGCAAATCCTGTTACTTACATGGGCTTTGGTGTTTGGAAGCTCTGGGGTATGGCTAAAGTTTTAGTCGGTTGGAATGATGATATTCAAGATACCCAATTTGGATTAAATAATAATGACTTGGACATCAACGGGCAGCCTACGCACACTGCTGGTGGTACCGGTGGTTCGAGAACCGTGTCAATTGACAATGATAACCTTCCTGCAACCGCTACAGATAAAGAAGTATTAGTTGCGGATAATGATGGTTCTGTTGTAATCGGTGGTTGTCAATTTGATCCAGACGATAGTGGTCCTGCATATCATAAGTATCGTCAAGAGAAAGCAACGACAAATATTTCACATGCGCCGCCTAAACCTATTGAAACATTAGATCCATATATCACAGTATATCGTTGGATGAGGATTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9d6a0ccdd6730a8c11cb1b0b2380f1cf5457b3f9b1036be2106a850621251cbb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6146
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Successful treatment of antibiotic resistant microbial bone infection with bacteriophages Nir-Paz,R., Gelman,D., Khouri,A., Sisson,B.M., Fackler,J., Oren,S.A., Khalifa,L., Rimon,A., Glazer,S.C., Moses,A.E., Yoram,W., Schooley,R.T. and Hazan,R. 2019-03-14 — GenBank