Protein

View in Explore
Genbank accession
QBI81057.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MRLIAIAAIIIMLSGCAVSQQTPVPRIPFPAAEFAALPTKGTGTLTGQVFMKTVGGDVKFGAGSTVYLVPVTSYSKQWYEVNYIGGQALEAPDPRSGQGSITTVADGNGNFTFTDIPPGDYFLSSTVTWQAPSKYGLLPQGGVVAKVVSIADGVKLREMLTR
Physico‐chemical
properties
protein length:162 AA
molecular weight: 17032,41420 Da
isoelectric point:8,73200
aromaticity:0,09259
hydropathy:0,19568

Domains

Domains [InterPro]
PS51257
STR
1–16
PS51257 SSF117074
QBI81057.1
1 162
Architecture
STR
STR
STR 1-16 | STR 23-153 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_Pae_BR141b
[NCBI] 		2563494 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBI81057.1 [NCBI]
Genbank nucleotide accession
MK511016.1 [NCBI]
CDS location
range 42247 -> 42735
strand -
CDS
ATGCGTTTAATCGCCATAGCAGCAATAATTATCATGCTGTCAGGTTGTGCCGTATCTCAACAAACGCCGGTCCCGAGAATTCCATTCCCTGCTGCTGAATTTGCCGCTCTTCCGACAAAAGGGACTGGCACATTGACTGGCCAGGTCTTTATGAAGACCGTTGGTGGAGATGTGAAATTCGGTGCAGGGAGCACAGTTTACCTAGTCCCCGTTACGTCCTATTCGAAACAGTGGTACGAAGTGAACTATATAGGAGGACAAGCGCTTGAGGCGCCAGATCCTCGATCAGGACAGGGGTCCATCACTACGGTGGCGGATGGGAACGGAAACTTCACATTCACGGACATCCCGCCAGGCGACTACTTCCTCAGTTCAACCGTCACTTGGCAAGCGCCATCGAAGTACGGACTCCTCCCCCAAGGAGGCGTAGTGGCCAAGGTCGTGAGCATCGCTGATGGTGTGAAGCTTCGCGAGATGCTCACACGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9a5d7cb96ea830d0861082971106bbc84343c87fd4bc966eac0b20fb2c39eec8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9150
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Mobilizing temperate bacteriophage communities and resolving individual phage genomes from cystic fibrosis and bronchiectasis Pseudomonas aeruginosa isolates Tariq,M.A., Everest,F.L.C., Cowley,L.A., Wright,R., Holt,G.S., Ingram,H., Duignan,L.A.M., Lanyon,C.V., Perry,A., Perry,J.D., Bourke,S., Brockhurst,M.A., Bridge,S.H., Soyza,A.D. and Smith,D.L. 2019 — GenBank