Protein

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Genbank accession
GENB_1d3de187cc1a [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MADLKAGSTTGGAVIWHQGNFPLMPAGDDVLYKTFKLYSEYNKPQAADNDFVSKANGGTYAARVTFNNGVQVPYAVNNTNQSGIFPGNGDNATFAVANIDIVSWNGIGFKSSQGSAARTVVINARNGDISTKGVVSASGQVRSDMTAPVAANDLTRKDYVDGRINIVTDNANSRVLRKGDTMTGTLTAPNFFSQNPASEANHVPRFDQIVIKDSVQDFGYY
Physico‐chemical
properties
protein length:221 AA
molecular weight: 23586,79390 Da
isoelectric point:6,72152
aromaticity:0,09502
hydropathy:-0,33484

Domains

Domains [InterPro]
DC_0466
STR
1–219
DC_0466
IPR005601
STR
56–195
IPR005601
GENB_1d3de187cc1a
1 221
Architecture
STR
STR 1-219 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_1d3de187cc1a
1 221
Domain Start End Length (AA) Confidence
N-terminal 1 124 124 0,3827
Central domain 125 210 87 0,1370
C-terminal 211 221 10 0,9095
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-124
Central
125-210
C-terminal
211-221

Taxonomy

  Name Taxonomy ID Lineage
Phage phage Ec3-ASingh
[NCBI] 		3390841 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
PQ561401.1_CDS_[complement(184..849)] [NCBI]
Genbank nucleotide accession
PQ561401.1 [NCBI]
CDS location
range 184 -> 849
strand -
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
943e60786e82f165a8f1b689ebfa9cb0033b945ef4a1333126b4a0ee519762f5

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,7099
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50