Protein

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Genbank accession
YP_004323654.1 [GenBank]
Protein name
tail fiber assembly
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,52
Protein sequence
MSQLNVGTLNVGTTQFTGDSSTLSTAPATSLTEFMTGTPAANQVVMWNGSAWVPAEMGGRFLGMNVYTSQNGTWNSKSQTGGSGTWTKPAGCNNVLVYVTGGGGGARINDNNYRGGGGGGGATAIKYIDVSAVSSVTATYGAGGSYVRNGGRASSGGTSSFGSYCTATGGQGGQTDPPHQGGPGGNASGGDINIPGGGGEMAHSSNREGGGGSSFWHKAGSSHHYYNNQEEITHGQWGSGGAYGYYSQNSFAYGNSSGGAGVVIVYNYS
Physico‐chemical
properties
protein length:269 AA
molecular weight: 26907,51210 Da
isoelectric point:6,57095
aromaticity:0,10037
hydropathy:-0,46208

Domains

Domains [InterPro]
DC_1790
STR
2–269
DC_1790
IPR049304
STR
81–259
IPR049304
YP_004323654.1
1 269
Architecture
STR
STR 2-269
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage Syn33
[NCBI] 		444878 Uroviricota > Caudoviricetes > Pantevenvirales > Brizovirus > Brizovirus syn33
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004323654.1 [NCBI]
Genbank nucleotide accession
NC_015285 [NCBI]
CDS location
range 34742 -> 35551
strand +
CDS
ATGTCACAGTTAAATGTTGGGACTCTAAATGTAGGTACTACGCAGTTTACTGGAGATTCTTCTACTCTAAGCACAGCACCTGCAACGTCTCTTACTGAGTTTATGACAGGAACCCCTGCTGCTAATCAAGTAGTTATGTGGAATGGATCTGCCTGGGTTCCTGCTGAAATGGGTGGAAGATTCTTGGGTATGAATGTATATACCTCACAGAATGGTACTTGGAACTCTAAATCACAAACGGGAGGAAGTGGAACTTGGACAAAACCTGCTGGATGTAATAATGTGCTGGTATATGTTACTGGCGGTGGTGGTGGTGCAAGAATTAATGATAATAACTACCGTGGCGGTGGTGGTGGCGGTGGAGCAACTGCAATTAAATATATCGATGTGTCTGCGGTATCATCTGTAACTGCAACATATGGCGCAGGTGGATCCTATGTAAGAAATGGTGGTAGAGCATCATCAGGTGGCACCTCTTCTTTTGGTTCTTATTGCACTGCTACTGGTGGACAAGGCGGACAAACAGATCCCCCTCACCAGGGTGGTCCTGGCGGAAATGCCAGTGGTGGAGACATTAACATCCCTGGTGGTGGTGGTGAAATGGCACACAGTAGTAACAGAGAAGGTGGCGGCGGCAGTAGTTTCTGGCATAAGGCAGGATCGTCGCACCATTACTATAACAACCAAGAAGAAATTACTCATGGTCAGTGGGGTTCTGGCGGTGCTTATGGTTATTATTCACAAAATAGTTTCGCATATGGAAATTCCAGTGGTGGTGCTGGTGTCGTAATCGTATACAATTATTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f453c68841840accfa7433772127be252dab466950b219967e55917a64fb1e82
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8059
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage Syn33 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank