Protein

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Genbank accession
YP_009999260.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MPKKTAPNQGLPYGWIRGEDYWGGPMSDSQIFLDTTLFLTLESLTFSAPPPNAVDGATYVVAANPTGAWAGHEGDVAVYVEKVWTFYTPRYGWRARVRSYEKFLWFNGTTWIDEATGEDPVNPDPDPSVKPKWYDIGVTVSDSMYANEPVVHLPILDPMYLPANMVGSQFDMADGASPAYYQFRVQRNGQNVATMTVEIGNFNASFTTSGGNPISFAAGDRMTVRAQQEAVAGMKNFGFVIRMGLV
Physico‐chemical
properties
protein length:246 AA
molecular weight: 27122,17950 Da
isoelectric point:4,72852
aromaticity:0,13415
hydropathy:-0,24268

Domains

Domains [InterPro]
DC_0494
STR
1–245
DC_0494
IPR021251
STR
32–111
IPR021251
YP_009999260.1
1 246
Architecture
STR
STR 1-245 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SeWh-1
[NCBI] 		2419754 Uroviricota > Caudoviricetes > Casjensviridae > Chivirus SeWh1 >
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009999260.1 [NCBI]
Genbank nucleotide accession
NC_053000.1 [NCBI]
CDS location
range 26186 -> 26926
strand -
CDS
ATGCCGAAAAAGACAGCCCCGAATCAGGGGCTACCCTACGGGTGGATTCGCGGGGAAGACTATTGGGGTGGCCCGATGTCCGACTCGCAAATCTTCCTCGACACCACGCTATTCCTGACACTGGAATCGCTGACCTTCTCCGCTCCGCCGCCTAACGCGGTGGACGGGGCCACCTACGTCGTCGCGGCCAACCCGACGGGGGCGTGGGCCGGGCATGAAGGCGATGTGGCCGTGTACGTGGAAAAGGTCTGGACGTTTTACACGCCTCGCTACGGGTGGCGCGCTCGCGTTCGTTCGTACGAGAAGTTCTTGTGGTTCAATGGCACGACGTGGATTGACGAGGCGACCGGGGAAGACCCGGTCAACCCTGACCCTGACCCAAGCGTTAAGCCGAAATGGTACGACATCGGGGTGACGGTGTCGGACAGCATGTACGCGAATGAACCTGTCGTGCATCTGCCGATCCTTGACCCGATGTACCTGCCCGCCAACATGGTAGGATCTCAGTTTGACATGGCCGACGGTGCAAGCCCGGCCTATTATCAATTTCGCGTGCAGCGCAACGGCCAGAACGTCGCAACGATGACCGTGGAAATCGGAAACTTCAACGCGTCGTTTACCACTTCCGGGGGCAACCCGATTTCCTTCGCGGCCGGGGATCGCATGACGGTTCGCGCGCAGCAGGAAGCCGTCGCCGGGATGAAAAACTTTGGCTTCGTAATTCGCATGGGACTGGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d77e3f77ea444e9af3ca7f1ea70666ff4148e4a184d881003e3072ac71c800be
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8737
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
SeWh_1, Complete genome sequences of 3 novel enterobacteria, Pakpunavirus like phages Yuan,S., Ma,Y. and Liu,Q. 2020-07-27 — GenBank