Protein

View in Explore
Genbank accession
YP_010674330.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,80
Protein sequence
MSRELMPKSGIMMPHVVINRDAAVVGVSTVDGVAGAVDLTGKYLQKTDAAATYQTKTEGASKTYVLDSIQPIMEGALFKADPFVDNNIPFRSAGANGVEYVDMIKVTPENSIKLGSYESSVQGVEIHSAGRVSVVDKNDSGVETKYPIYSKRFRPEIEDLPFAAIGSYVKDSKGRTIGVNRTGINSDIKQFTQKVTFQQPVTVADGVGDYDAVTMRQLRNSGGGSGGPTMSGISNFGIGDFHLRDSRAFIPAFEVPSDGQLLSRTEYPDLWAYAQLITPIEDADWLADPLKRSQYSLGDGSTTFRVPDKNGIQSGSLKGLFGRGSGDFTQKIHESAAPNISGTFGRLVYASQGSVYEANSGTGAFYSFAPQNKYKRMSDITSLEGSGATYPSGYEFSASLSSPVYGRQNVSEIRPNSFVGVWTIRAHGGFVAANTSWAVINQDATKPSSGVTADGGEVISRYSVNGVTEAQMSFRMRAAIGGNYYARLAVYNATNDRTAVYDFNEVGDFSIGGTFFARGGLVANNALTLTDGQYPKIEMQPLYIGGGTVPSTVVGGAMFFESALAANGTKYYRLFFRRKDGNRTGEVTLDFPTSTSGTIALQGTSGREYKKDIVDAESKEAFDRINNQRLVNFVYKDDEQERVRFGIIAEEAELIAPQYIKHGKAIVHETFDKDGNKTGEVLKDRPSVDNNPIVMDLMGAVQYLKGEVDQLRAELAELKDGK
Physico‐chemical
properties
protein length:722 AA
molecular weight: 78155,37080 Da
isoelectric point:5,56973
aromaticity:0,09695
hydropathy:-0,33906

Domains

Domains [InterPro]
DC_1514
STR
20–315
DC_1514 DC_0203
DC_0608
ATT
235–600
DC_0608 IPR030392
SSF88874
STR
257–428
SSF88874 IPR030392 Coil
YP_010674330.1
1 722
Architecture
STR
ATT
RBD
STR 20-234 | ATT 235-600 | RBD 601-722
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010674330.1
1 722
Domain Start End Length (AA) Confidence
N-terminal 1 484 484 0,4600
Central domain 485 683 200 0,1002
C-terminal 684 722 38 0,9757
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-484
Central
485-683
C-terminal
684-722

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Paul
[NCBI] 		2589659 Uroviricota > Caudoviricetes > Mktvariviridae > Kuravirus > Kuravirus paul
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010674330.1 [NCBI]
Genbank nucleotide accession
NC_070992 [NCBI]
CDS location
range 14287 -> 16455
strand +
CDS
ATGTCTAGAGAATTAATGCCCAAGTCCGGTATAATGATGCCACACGTAGTAATCAACAGAGATGCTGCGGTAGTTGGTGTCTCTACTGTAGATGGAGTTGCTGGTGCTGTTGATCTTACTGGTAAATACTTACAGAAAACTGATGCGGCAGCTACTTATCAAACAAAAACTGAAGGTGCTTCTAAGACTTACGTTTTAGATTCAATCCAACCTATCATGGAAGGTGCTTTGTTTAAAGCTGACCCTTTCGTAGATAATAATATTCCTTTCCGTTCCGCTGGAGCTAATGGTGTAGAATATGTGGATATGATTAAGGTTACTCCAGAGAACTCAATCAAGCTTGGCAGCTATGAGTCTTCTGTTCAAGGGGTTGAGATTCACTCTGCTGGTCGTGTTTCAGTTGTTGACAAAAACGATTCTGGTGTGGAAACTAAATATCCAATTTACTCCAAACGATTTCGTCCTGAGATTGAAGATTTGCCATTTGCAGCTATTGGTTCTTATGTTAAAGATTCTAAAGGACGCACCATTGGTGTAAACCGTACGGGAATCAACTCTGATATCAAACAGTTTACTCAGAAAGTTACCTTCCAGCAGCCTGTAACAGTTGCAGACGGTGTGGGTGATTATGATGCTGTGACTATGAGACAGTTACGTAACAGTGGGGGTGGTTCTGGTGGTCCTACAATGAGTGGTATTTCTAACTTTGGTATTGGTGATTTCCATTTACGTGACAGTCGAGCCTTTATTCCTGCTTTTGAAGTCCCTTCAGATGGTCAGCTCTTGAGTAGGACAGAGTATCCAGACCTATGGGCCTATGCTCAGCTTATCACTCCAATAGAGGATGCTGATTGGCTTGCAGACCCACTTAAAAGATCTCAGTATTCACTAGGTGATGGTTCTACTACTTTCCGTGTCCCTGATAAGAACGGTATCCAGTCTGGCTCTTTGAAAGGGTTATTTGGTCGTGGTAGTGGAGACTTCACTCAGAAAATCCATGAATCAGCTGCTCCTAATATTTCGGGAACCTTCGGGAGATTGGTGTATGCTTCTCAAGGATCTGTATATGAAGCAAATTCAGGGACGGGGGCCTTCTATAGTTTTGCTCCACAGAACAAATATAAACGTATGTCCGATATCACCAGTTTGGAAGGTTCAGGTGCAACATATCCTAGTGGTTATGAATTCAGTGCTTCACTGTCTAGTCCAGTTTATGGTCGTCAAAACGTCTCCGAGATTCGTCCTAACTCCTTTGTAGGTGTTTGGACTATTCGTGCACATGGTGGTTTCGTAGCTGCTAACACTTCTTGGGCTGTTATTAACCAAGATGCCACTAAACCTTCTTCTGGAGTTACAGCAGATGGTGGGGAGGTTATTTCAAGATATTCTGTTAATGGGGTTACTGAGGCTCAGATGAGTTTTAGAATGAGAGCGGCTATTGGTGGTAACTATTACGCCCGATTGGCTGTTTACAATGCTACCAACGATAGAACCGCAGTCTATGACTTTAATGAGGTGGGGGATTTTTCTATAGGCGGAACATTCTTCGCTAGAGGAGGTCTTGTAGCTAACAATGCCCTTACTTTAACAGATGGACAATACCCGAAAATAGAGATGCAACCTCTTTATATTGGTGGTGGGACTGTTCCGAGCACTGTTGTTGGTGGAGCAATGTTCTTCGAATCCGCTCTAGCGGCCAACGGGACTAAATACTATAGATTGTTCTTCCGTCGTAAAGATGGGAACCGGACAGGTGAGGTTACTCTTGATTTCCCGACTTCTACCTCTGGTACAATAGCTCTTCAAGGTACTTCTGGTCGTGAGTATAAGAAAGATATAGTTGATGCAGAGAGTAAAGAAGCTTTTGACAGAATCAACAATCAACGTCTAGTTAACTTTGTTTATAAGGATGATGAACAGGAGCGTGTTCGGTTTGGTATCATCGCTGAGGAAGCGGAGCTTATTGCCCCTCAGTATATTAAACATGGTAAAGCGATTGTTCATGAAACTTTTGATAAAGACGGTAATAAAACTGGAGAGGTTTTGAAAGATCGTCCTTCAGTTGATAACAACCCGATTGTTATGGACTTGATGGGTGCTGTTCAATATCTCAAAGGAGAGGTTGATCAATTGAGAGCAGAGCTTGCTGAGCTTAAAGATGGTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8ef53337296b7f45484b19cefb0d9e643b9951216ec3f98c7e97ea2f198b856e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6119
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50