Protein

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Genbank accession
GENB_b670082930dd [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MGYFQMTRNVEELFGGVITAPHQIPFTYKSNVGGETFLSLPFYPVTGVITINGGMQVPLDNFEIEGNTLNLGRALSKGDVVYCLFDKILSPEDTAKGIRIYKFQAVGGETEFTPDFTSYGVQSLYISGEYKTPEIEYSYDSTTGKVSLQTALTAGVWVVAEMSVKQPNISPAFDRSIQEIARSANVKDSEVIVSTDTISLLDGKKVVFDVIAQKSYGLPTLPTNVFISSVNGNQLTYNPGGVVVDLLPAPNDVTPVENELQAYKTAMATDGGTLVNSGLSGVSSAIKRTIDSHFKDYYNVKDFGAVGDGVTDDTEAIQLAVSYLGDLTTKTMFSRPSVLFFPDGDYLTSKPIIAWDGVSIRGASQSSTRIVMTSSTNTTEVTTNSPVRNLPRNVNCIIAVFSSVAGYPYRTTISDIQLYGIAGTTGVTTGKVVHAIYAPEAAFLTVERVRTWYTNYGIMSYNLWMCSFRDLDLREHAEWSFLLSNDGTGAGGSTSISLERVYGHTSEGGIKLYGANYSTLSSCGVDAAGSSNPSAADAASKAPYVFESCQGLVASSLGAESIYTRRCIFIIGGHVTLNEPDLYAWRGDVTGRRMYGIHITSNGNLVLNGGRLWGIQFSAASATECFAIAQTDGINGSVQCNGSLISDASVDSVGTAIGNIFFGSRTYRGRTIQQEAGISRYQTNTLTLVASVTTGDLFSSGLDTTRYTVIDAVAQIHSNSPTLDQAKLQVQVMNVSANSARIWIINPDGTANFTTQTLRVTFTYRVN
Physico‐chemical
properties
protein length:767 AA
molecular weight: 82497,53990 Da
isoelectric point:5,08217
aromaticity:0,09648
hydropathy:-0,02842

Domains

Domains [InterPro]
DC_0063
STR
1–765
DC_0063
G3DSA:3.30.2020.50
ATT
161–251
G3DSA:3.30.2020.50 IPR012334
IPR011050
STR
296–656
IPR011050
IPR024535
ENZ
298–388
IPR024535
GENB_b670082930dd
1 767
Architecture
STR
ATT
STR
STR 1-160 | ATT 161-251 | STR 252-765 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_b670082930dd
1 767
Domain Start End Length (AA) Confidence
N-terminal 1 312 312 0,9921
Central domain 313 668 357 0,9902
C-terminal 669 767 98 0,9834
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-312
Central
313-668
C-terminal
669-767

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SeTs-2
[NCBI] 		2698913 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
MN871504.1_CDS_[complement(43419..45722)] [NCBI]
Genbank nucleotide accession
MN871504.1 [NCBI]
CDS location
range 43419 -> 45722
strand -
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
dc70781e94f70f6821ad305b9d625fb43bc65acb28f086d65bab5dea7431a739

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,6773
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50