Protein

View in Explore
Genbank accession
AUS02106.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,75
Protein sequence
MTVKQFALGGVNEVVEFGKDGHQLDASNSGYIEIKNTGGTLIRVKGAAATASDEFVTKLQLDAVNALAGGYLSFSYDASGNISQLSGEGSGDSGAVLYGDTYKVGTSGTFLGQSAQAGDLVTALVAGADVADNTASNTDWMLIEIRTASDLADGSSTDHSSGKIIVKDAGVSTDKIADNAVTLAKMADNSVDTAEIVDRAVTGAKVGLATLTDENHANNTITKGKLSASVQTTLSNADTEFGTRTPNLESIIGASIDADTDSTVPAHTNYATATNLHGQIAQLDTQIKNHDDIAALRKATVSHDGGAQNVGSSIASGRVLTTIMVTPVTVANGANCVMSIGVSGDASKYVAAADIDLEEATTQVFHVNAELSGSEQIVATVTQGTATQGSFLVTVQHG
Physico‐chemical
properties
protein length:398 AA
molecular weight: 40536,06060 Da
isoelectric point:4,49081
aromaticity:0,04020
hydropathy:-0,04246

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUS02106.1
1 398
Domain Start End Length (AA) Confidence
N-terminal 1 29 29 0,9652
Central domain 30 228 200 0,0344
C-terminal 229 398 169 0,8836
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-29
Central
30-228
C-terminal
229-398

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 2.095.A._10N.286.46.E10
[NCBI] 		1881403 No lineage information
Host Vibrio sp. F12
[NCBI] 		2070776 Pseudomonadota > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS02106.1 [NCBI]
Genbank nucleotide accession
MG592664 [NCBI]
CDS location
range 16121 -> 17317
strand +
CDS
ATGACAGTTAAGCAATTTGCCCTAGGTGGCGTAAACGAAGTAGTAGAGTTCGGCAAAGACGGCCATCAGCTTGATGCGTCAAACTCTGGCTACATTGAAATTAAGAACACAGGCGGAACACTGATTCGCGTTAAAGGCGCAGCAGCTACAGCTTCTGATGAGTTCGTAACTAAGCTTCAACTTGACGCTGTAAACGCTCTAGCGGGTGGTTACTTGTCATTTAGCTACGATGCATCAGGTAATATTTCTCAGCTATCAGGTGAGGGCTCTGGTGACTCTGGTGCGGTTCTTTACGGTGATACGTACAAGGTGGGCACTTCTGGTACTTTCCTTGGCCAATCAGCTCAAGCGGGTGACTTAGTTACAGCTCTAGTTGCTGGCGCTGATGTTGCAGACAATACAGCATCAAACACTGATTGGATGCTTATCGAGATTCGCACAGCTTCAGACCTTGCAGATGGCTCTTCAACTGACCACTCAAGCGGCAAGATTATTGTCAAAGACGCCGGTGTAAGTACAGACAAGATCGCAGATAACGCAGTAACTCTTGCGAAGATGGCTGATAACTCTGTTGATACAGCGGAGATTGTTGACCGCGCTGTTACTGGTGCAAAAGTTGGTCTTGCGACTCTTACTGATGAGAACCACGCAAACAACACAATCACTAAGGGCAAGCTGTCTGCTTCAGTTCAAACAACTCTGTCTAATGCTGACACTGAGTTTGGCACTCGCACTCCCAACCTTGAATCTATCATTGGCGCTTCAATTGACGCTGACACTGATAGCACAGTTCCAGCTCACACAAACTACGCTACAGCGACCAACCTGCACGGTCAGATTGCTCAACTTGACACGCAAATCAAGAATCATGATGACATTGCAGCACTTCGTAAGGCTACAGTATCTCACGATGGCGGCGCTCAAAACGTAGGTTCTTCAATTGCATCAGGTCGCGTGCTAACTACTATTATGGTAACTCCGGTTACAGTAGCTAACGGCGCTAACTGCGTAATGTCCATTGGTGTATCTGGAGATGCTTCTAAGTATGTGGCTGCGGCTGACATTGACCTAGAAGAAGCTACTACTCAGGTATTCCACGTTAACGCCGAGCTATCTGGCTCTGAGCAAATCGTTGCAACTGTCACTCAAGGCACTGCAACTCAAGGTTCATTCCTTGTAACTGTTCAGCATGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bac25789b32bdbcf171a3cf9b8d22828f35236881afd5e5ca3ac19ac31540def
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7162
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank