Protein

View in Explore
Genbank accession
YP_009290592.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MVDTCNINGVCGTGDWNGPKPGDPNMNDLLLKATPAFGGIDIEFTWPTTNPGAVGTTRLFRSTSPDFAGATIRAFVSGNFYFDKTDPGSKVDQRYYYWIQLVSINGTDGEIIGPASATARPLIEQMIEQLTGEIDSGLLSQELRKEIAQIELNKLGITQEEIERAKNDDALGVRLTQIDAKMDQNTAILQEEVRARVTADSSLVQTVNTMYADFNGNIAAIQQENTALATKVNALASSVTTINATVNGDSASGKVGLVAEVQTLDGKVTQIGARWTATVDVNGLVGGFGVYNDGRTVEAGFNVDRFWIGRPGTPKNPGSYPFIIDNNIVYIKEAAIQKLTFDKLRAQDGSFIVQNGKIQADYIEAKDIVVNNIQSDNYQPGVQGWAFRPNGIMEINGTAGTGRMTINNATIKVFDQAGKLRVHIGNLQA
Physico‐chemical
properties
protein length:429 AA
molecular weight: 46306,41330 Da
isoelectric point:4,81275
aromaticity:0,07459
hydropathy:-0,23590

Domains

Domains [InterPro]
DC_1382
STR
25–429
DC_1382
IPR013783
STR
31–118
IPR013783 Coil IPR015406
IPR053171
Unmapped
149–413
IPR053171
YP_009290592.1
1 429
Architecture
STR
STR 25-429
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeP_MAG4
[NCBI] 		1639814 Uroviricota > Caudoviricetes > Schitoviridae > Litunavirus > Litunavirus Mag4
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009290592.1 [NCBI]
Genbank nucleotide accession
NC_031104.1 [NCBI]
CDS location
range 34175 -> 35464
strand -
CDS
ATGGTAGACACTTGCAACATCAATGGGGTCTGCGGAACTGGGGACTGGAATGGTCCTAAGCCCGGTGACCCCAACATGAATGATCTGCTGCTGAAGGCAACTCCTGCCTTCGGTGGTATCGACATTGAGTTCACTTGGCCAACTACGAACCCAGGTGCAGTTGGCACTACTCGACTGTTCCGTAGTACTTCCCCTGACTTCGCAGGTGCAACTATCCGTGCCTTCGTCAGTGGTAACTTCTACTTCGACAAGACGGACCCAGGCTCCAAGGTAGATCAGCGGTACTACTACTGGATTCAGTTGGTTTCGATCAATGGCACTGATGGGGAGATCATTGGCCCAGCTTCGGCTACTGCTCGTCCACTCATTGAGCAGATGATTGAGCAGCTTACTGGTGAGATTGACAGTGGTCTTCTTTCCCAAGAGTTGAGGAAAGAGATTGCTCAGATCGAACTGAACAAGCTGGGGATCACCCAGGAAGAGATTGAACGAGCCAAGAACGATGATGCTCTCGGTGTTCGTCTCACTCAGATCGATGCGAAGATGGATCAGAATACTGCCATCTTGCAGGAAGAGGTTCGTGCTCGTGTAACTGCTGACAGTTCTCTGGTTCAGACGGTCAACACCATGTACGCCGACTTCAACGGGAACATCGCAGCAATCCAGCAGGAGAACACTGCACTGGCAACCAAGGTTAATGCCTTGGCTTCTTCAGTGACCACGATCAACGCCACCGTCAACGGAGACTCGGCCTCTGGTAAGGTTGGCTTGGTTGCAGAGGTACAGACCCTGGACGGTAAGGTTACCCAGATCGGTGCTCGCTGGACTGCCACTGTTGATGTGAATGGTTTGGTTGGTGGCTTCGGTGTGTACAACGACGGTCGCACTGTCGAAGCTGGCTTCAACGTAGACCGCTTCTGGATCGGTCGTCCTGGCACTCCGAAGAACCCAGGCAGCTACCCGTTCATCATCGACAACAACATCGTCTACATCAAGGAAGCTGCCATCCAGAAGTTGACCTTCGACAAGCTCAGGGCACAGGATGGTAGCTTCATTGTTCAGAACGGGAAGATCCAGGCTGACTACATCGAAGCCAAAGATATCGTGGTGAACAACATCCAGTCGGACAACTACCAACCAGGTGTCCAAGGCTGGGCATTCCGTCCCAACGGGATCATGGAAATCAACGGTACGGCAGGCACTGGCCGTATGACTATCAACAACGCCACCATCAAGGTGTTTGACCAAGCAGGCAAACTCCGGGTGCACATTGGGAACCTACAAGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
26dca5523d588df95e2df0ae0aa6acf34f575360abb20c22a5b71a48abd13353
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7866
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage vB_PaeP_fi6 - a new obligatorily lytic Pseudomonas aeruginosa podovirus active against pathogenic P. aeruginosa strains Kwiatek,M., Parasion,S., Miziak,L., Gryko,R. and Lobocka,M.B. 2014-07-04 — GenBank