Protein

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UniProt accession
A0A8D9UHD8 [UniProt]
Protein name
mRNA splicing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,71
Protein sequence
MANIMRLGGGADGGGGELNIAYGLTPPSDTSKLWVRIADEPNSVTVQAVIPFGNEAVTAYGVSTLQYANTQGLTYCNGLLYIFSGYEVYVYENGSWSKFLTLSNTATVHHTAPSVVIGKKIFRLFGHNNGNAPGGAASAAYSIQKILMIDTETKTYSEVAVSGITRNCQLGNAVVVGKKIYFTAGQDGASGYDGYEKSSHIYEIDSDDPSTATDIGYLFITSADMRGTSVVAAGGKLYARHGGSAAEGSIPYTDWMEIFDLETKVLTRNQISISKGGQGSCFMPGINIGKYIYWFGGVPKGKVPTSFITTHQTTYAQRYNIETGEFDFVTVGEHAGVYINSVMLTNSELLFAKYGGNAPLYKFKGAYELENGKLFIQEGFLDNTWNAVKGKDWDLKVGVSGVYLGGTDGYAQAKDAYLYDLTQQKWVSLDGTPFGEVTPEPTPTPTLEGTWVLNDTLTAPESSTLTQVISGTIAASQGNSPLYSIQYVNNKMHFYMSAVQIYSTYDFETNQWANKVTSETFPSGATASDNFITWLAANATKQ
Physico‐chemical
properties
protein length:542 AA
molecular weight: 58537,66720 Da
isoelectric point:5,07455
aromaticity:0,12177
hydropathy:-0,17860

Domains

Domains [InterPro]
IPR011043
STR
75–345
IPR011043
IPR015915
STR
86–438
IPR015915
A0A8D9UHD8
1 542
Architecture
STR
STR 75-438 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8D9UHD8
1 542
Domain Start End Length (AA) Confidence
N-terminal 1 58 58 0,6155
Central domain 59 275 218 0,8219
C-terminal 276 542 266 0,2545
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-58
Central
59-275
C-terminal
276-542

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctoNj20
[NCBI] 		2826085 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAD55421.1 [NCBI]
Genbank nucleotide accession
BK014724 [NCBI]
CDS location
range 17007 -> 18635
strand +
CDS
ATGGCTAATATTATGAGACTTGGCGGGGGTGCTGACGGCGGCGGAGGAGAACTAAACATAGCTTATGGTCTTACCCCGCCCAGCGATACAAGCAAGCTGTGGGTACGGATTGCAGATGAACCCAATTCTGTAACTGTTCAAGCAGTTATACCATTCGGTAATGAGGCAGTTACTGCGTATGGAGTAAGTACACTGCAATATGCTAATACACAGGGATTGACATATTGTAATGGATTACTTTACATTTTTTCTGGATATGAAGTTTATGTGTATGAAAATGGTTCGTGGTCTAAGTTTTTGACCCTAAGTAATACAGCAACAGTACATCACACAGCACCTTCTGTAGTTATTGGCAAAAAAATCTTCCGATTGTTTGGACATAATAATGGTAATGCACCTGGGGGAGCTGCAAGTGCTGCGTATAGCATACAAAAAATACTTATGATAGATACAGAAACAAAAACCTATTCTGAAGTCGCTGTATCTGGTATAACTCGTAATTGTCAACTTGGCAATGCTGTTGTAGTAGGTAAAAAAATCTATTTTACTGCTGGGCAAGATGGAGCATCTGGTTATGATGGATATGAAAAATCTTCCCATATATATGAAATAGACTCTGATGACCCATCAACTGCTACGGATATAGGATATTTGTTCATTACTTCTGCTGACATGAGAGGAACCTCTGTAGTAGCTGCTGGCGGTAAATTATATGCAAGACACGGAGGTTCCGCAGCAGAAGGTTCCATACCATATACAGATTGGATGGAGATTTTTGACTTAGAAACAAAGGTTTTGACAAGAAATCAAATATCCATAAGTAAAGGTGGTCAGGGCAGTTGTTTTATGCCTGGAATAAACATAGGAAAGTACATTTATTGGTTCGGTGGAGTACCTAAAGGAAAAGTACCAACCAGTTTTATAACTACACACCAGACTACCTATGCACAAAGATATAACATAGAGACTGGGGAATTTGATTTTGTAACTGTCGGAGAACATGCTGGTGTTTACATTAACTCTGTCATGTTAACAAACTCAGAGCTGCTTTTTGCTAAATATGGAGGGAATGCTCCACTTTACAAATTCAAAGGAGCTTATGAGCTGGAAAACGGAAAACTCTTTATTCAGGAAGGGTTTTTGGACAACACATGGAACGCAGTTAAGGGCAAAGACTGGGACTTGAAGGTAGGGGTGAGCGGAGTGTACCTCGGAGGCACTGATGGTTATGCACAGGCCAAGGATGCATACCTATATGACCTCACTCAGCAAAAATGGGTTTCCTTAGATGGCACACCGTTTGGTGAGGTAACACCTGAACCCACACCTACACCGACGCTTGAGGGGACGTGGGTGCTGAATGATACGCTGACTGCGCCGGAGAGTAGTACCCTTACACAAGTCATAAGCGGTACAATCGCAGCGTCCCAAGGAAATTCCCCTCTTTACAGTATTCAGTATGTCAACAATAAAATGCATTTTTACATGAGTGCAGTCCAGATTTATTCCACTTACGATTTCGAAACCAATCAATGGGCAAATAAAGTAACTTCTGAAACATTCCCCTCTGGTGCCACGGCATCTGACAACTTCATCACGTGGCTGGCAGCAAACGCCACCAAACAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
88077377bf7ba1aed82d10faa4f96551a499c602d8bf2db48b57222bc0300058
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6798
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50