Protein

View in Explore
Genbank accession
QIN99975.1 [GenBank]
Protein name
putative pore-forming tail tip protein
RBP type
TF
Evidence RBPdetect
Probability 0,78
Protein sequence
MTDKLIRELLIDVKQKGATRTAKSIENVSDALENAAAASELTNEQLGKMPKTLYSIERAADRAAKSLTKMQASRGMMGITKSMDSIGAKLDDLAIAMIEVSDKLESGFTHVGKSVKAMGNDVAAATEKVQDRLYDTNRVLSGTTRGFNDTTTSAGRASRALGNTSGSARGATRDFAAMAKVGGSLPLMYAAIASNVFVLQSAFEQLKMGDQLNRLEKFGTIVGTQTGTPVQTLARSLQEAAGYAISFEEAMRQASSASAYGFDAEQLNKFGLVARRAAAVLGVDMTDALNRVIKGVSKQEIELLDELGVTIRLNDAYADYVKQLNAANTGITYNVNSLSTFQKQQAYANAVIAESTKRFGYLDDVLRATPWEQFAANADAALRKVQQAAAKYLGPVIDSINAVFYTSQASISASAARAQEETNRQIDPTNVGAVALSLSASEEGYNKALDMYKESLDKRNKLKTEFDKRMSQADASTAAAIRLVGEGMPVGLAAGGFEVGGVRIGSSEANKKFVEETAAMGLQVARLGKEVDDSTENLNAWKSAYQAAGAAAAKTNPEFQKQINLQKDMNDPDAVYDFNSATLKGLTEQQKAYDQAKKTASDLANDIQNIAENTNTAAKTSASLSDTIKTIESLSAGTGKNADEYVKSLNLGYNTLSEMKTASQALAGYVKLTSNETKNQLEVQQKIAEVYNQTKDKEKAQEAGRRLEIQQLEEQEAALKRVLETNKGNKAIENEIAKVQLERIKITNQDMEAQKKVKDYTDKILGVDREIALLNNRTMTDTQYRLAQLNLELTIEKEKYEWYTKQADKQKEAEQSRRAQAQIGREIWKFRQDQQAEMTSKRQEAFENTLTSMFPLAGEMQKMEMQLDFYTKMKELTKGNANEQMRWNAEIAKTRAQMSALTAQRNAQMQQQVGSSVGATYTPTTGLSGDDKKYADMQNQMASYDEAISKLGALNSQATEVGQSMGNLTNAMMQFSQGSLDTVSTVAAGMQMVSSMIAMGVSNQVSAIDQAIAAEQKRDGKSEASKAKLKKLEAEKVKIQQDAAKKQIIIQTAVAVMQAATAVPYPWSIPLMIAAGVAGALSLAQASSASGMSSIGDSGTDTAQYLSLGERQKNVDVSMSANAGELSYIRGDQGIGNANSFVPRAEGGNMYPGVSYQMGEHGTEVITPMVPMKATPTDELKGSSKGTSGRPIVLNISTMDAASFRDFASSNSAAFRDAVEQALNENGTTLKSLGNS
Physico‐chemical
properties
protein length:1236 AA
molecular weight: 133368,51180 Da
isoelectric point:5,87604
aromaticity:0,05421
hydropathy:-0,44345

Domains

Domains [InterPro]
IPR056207
TAS
1–81
IPR056207 DC_0073 IPR056208
Coil
Unmapped
586–613
Coil Coil Coil
QIN99975.1
1 1236
Architecture
TAS
STR
TAS
TAS 1-81 | STR 82-1198 | TAS 1199-1234 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage ende
[NCBI] 		2713296 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus ende
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIN99975.1 [NCBI]
Genbank nucleotide accession
MT074454 [NCBI]
CDS location
range 22985 -> 26695
strand +
CDS
ATGACTGATAAGCTAATACGAGAACTACTTATAGATGTAAAGCAGAAAGGGGCAACCCGTACTGCAAAGTCTATTGAAAACGTATCTGATGCGTTAGAAAACGCTGCTGCTGCTTCCGAACTGACTAATGAGCAGCTAGGAAAAATGCCCAAAACTCTTTATTCCATTGAGAGGGCAGCAGATAGGGCAGCCAAAAGTCTAACAAAAATGCAGGCTAGCAGAGGTATGATGGGCATCACCAAATCTATGGATAGTATTGGTGCTAAGTTAGATGACCTTGCTATTGCTATGATTGAGGTATCTGATAAGCTAGAGTCTGGATTTACACATGTTGGTAAATCTGTTAAGGCGATGGGTAACGATGTAGCTGCTGCAACTGAAAAAGTTCAAGATAGATTATACGATACAAACCGTGTTTTGTCAGGTACTACTAGAGGCTTCAATGATACTACCACATCCGCAGGTCGTGCTAGTCGTGCTCTAGGTAATACATCTGGTTCTGCACGCGGTGCTACTCGTGACTTCGCAGCAATGGCTAAAGTTGGTGGTTCTCTACCTCTTATGTATGCTGCTATCGCATCTAACGTGTTCGTTCTACAATCTGCATTCGAACAACTTAAGATGGGTGACCAGTTAAACCGTCTGGAGAAGTTCGGTACTATTGTAGGTACTCAAACAGGTACTCCGGTACAAACTCTAGCTAGATCTCTACAAGAGGCTGCTGGTTATGCAATCTCCTTCGAAGAAGCAATGAGACAGGCATCCTCTGCTTCTGCATATGGATTCGATGCTGAACAACTTAATAAATTTGGTCTAGTAGCTCGTCGTGCTGCTGCTGTTCTTGGTGTTGATATGACTGATGCACTTAACCGTGTAATCAAAGGTGTATCTAAACAAGAAATCGAACTTCTGGACGAACTTGGTGTTACTATTCGTCTTAATGATGCTTATGCTGACTACGTTAAACAGTTAAATGCTGCTAACACAGGTATCACATATAACGTCAATAGTCTTTCCACCTTCCAAAAGCAACAAGCATATGCTAACGCAGTAATTGCTGAATCTACTAAACGTTTCGGCTACTTGGATGACGTACTCCGTGCAACTCCATGGGAACAGTTTGCTGCTAACGCTGATGCTGCACTAAGAAAGGTTCAACAGGCTGCTGCTAAGTATTTAGGACCGGTAATTGATTCTATTAACGCAGTATTCTATACTTCTCAAGCATCTATCTCGGCTTCTGCTGCTAGAGCACAAGAAGAAACTAACCGTCAGATTGACCCAACTAACGTTGGTGCTGTAGCTTTAAGTCTTTCCGCTTCCGAGGAAGGATATAATAAAGCTCTTGATATGTATAAAGAGTCTCTGGATAAGCGTAATAAACTAAAGACTGAGTTTGATAAACGTATGTCCCAAGCAGATGCTAGTACTGCTGCCGCTATTAGATTAGTGGGTGAGGGAATGCCTGTTGGATTAGCTGCTGGGGGATTTGAAGTAGGGGGAGTGCGCATAGGTTCTTCCGAAGCTAACAAAAAGTTTGTAGAAGAAACCGCAGCTATGGGACTACAGGTAGCAAGGTTAGGTAAAGAAGTTGATGATTCTACTGAAAACCTTAATGCTTGGAAATCTGCGTATCAAGCTGCTGGTGCTGCGGCTGCTAAGACTAATCCAGAATTTCAGAAGCAGATTAATCTGCAGAAGGATATGAATGACCCCGATGCGGTTTATGACTTTAACTCCGCAACTCTGAAAGGACTGACGGAACAGCAGAAAGCATATGATCAGGCTAAGAAAACTGCTAGTGATTTAGCTAACGATATCCAGAACATTGCCGAAAATACTAATACTGCGGCTAAAACTAGTGCATCCCTATCGGATACGATTAAGACTATTGAGTCTCTATCTGCCGGCACTGGTAAAAATGCTGATGAGTATGTTAAGAGTCTGAACTTAGGGTATAATACTCTTAGTGAGATGAAGACTGCCTCACAAGCTCTTGCTGGTTATGTAAAATTAACTAGTAATGAGACTAAAAATCAGCTAGAAGTTCAGCAAAAGATTGCCGAAGTGTACAACCAGACCAAGGATAAAGAGAAAGCACAGGAAGCGGGTAGACGTCTAGAAATCCAACAGTTAGAAGAACAGGAAGCAGCTCTTAAGCGTGTCCTAGAAACTAACAAAGGTAACAAGGCAATTGAGAATGAAATAGCTAAGGTTCAGTTAGAACGTATCAAAATTACTAACCAGGACATGGAAGCTCAGAAGAAAGTTAAGGACTATACGGATAAGATTCTTGGTGTTGATCGTGAAATAGCTCTCTTAAATAACCGTACTATGACAGATACTCAGTATCGTCTAGCACAGTTAAATCTTGAATTGACTATTGAAAAAGAGAAGTACGAATGGTATACAAAACAAGCTGATAAGCAGAAAGAAGCTGAACAATCAAGACGTGCTCAAGCACAGATAGGGCGTGAAATCTGGAAATTCCGCCAAGATCAGCAAGCTGAAATGACCAGTAAAAGGCAAGAAGCCTTTGAAAATACTCTAACTTCCATGTTCCCTCTGGCAGGGGAAATGCAAAAAATGGAAATGCAGTTAGATTTTTATACCAAGATGAAAGAACTTACCAAAGGTAATGCTAACGAGCAAATGCGCTGGAATGCTGAAATAGCCAAGACAAGGGCTCAGATGTCGGCTTTAACAGCACAACGTAATGCTCAGATGCAGCAACAGGTAGGTTCTTCTGTTGGAGCTACTTATACTCCTACGACTGGTTTATCTGGGGATGATAAGAAGTATGCTGATATGCAGAACCAGATGGCCTCTTACGACGAAGCTATTTCTAAACTTGGAGCATTAAATAGCCAAGCAACGGAAGTTGGCCAGAGTATGGGAAATCTTACTAATGCCATGATGCAGTTCTCTCAGGGATCTTTAGATACTGTTAGCACTGTGGCGGCAGGTATGCAGATGGTTTCTTCAATGATTGCTATGGGAGTAAGTAATCAAGTATCAGCTATTGACCAGGCTATTGCAGCAGAGCAAAAACGTGACGGTAAATCCGAAGCATCTAAAGCTAAGCTCAAGAAACTGGAAGCGGAAAAGGTTAAGATCCAGCAAGACGCAGCTAAGAAGCAGATCATAATTCAGACGGCAGTAGCGGTGATGCAAGCAGCAACAGCTGTTCCTTACCCGTGGTCTATCCCTCTTATGATTGCAGCAGGTGTTGCAGGTGCATTGTCTCTTGCACAAGCATCCTCTGCATCTGGTATGTCTTCTATTGGAGACTCGGGTACTGATACAGCTCAATACTTGTCTCTTGGAGAGCGTCAGAAGAACGTAGACGTTTCTATGTCGGCTAACGCAGGAGAACTTTCTTATATTCGAGGAGATCAAGGGATTGGTAATGCGAACTCTTTCGTACCTCGTGCAGAAGGTGGTAATATGTATCCTGGAGTTAGTTACCAGATGGGTGAGCATGGTACCGAAGTAATCACTCCTATGGTTCCGATGAAGGCTACTCCTACTGATGAACTCAAAGGATCTTCAAAAGGTACATCGGGTAGACCTATTGTGCTGAACATCAGTACGATGGATGCGGCTAGCTTCCGAGACTTTGCTTCGAGTAACAGTGCTGCTTTCAGGGATGCCGTGGAACAGGCTCTTAATGAGAATGGAACCACCCTGAAATCACTTGGTAATTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8fe274f1100b69d797e8e9a180d9076be14db2dcf63c598523ab6c18d2815f26
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4190
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential Olsen,N.S., Hendriksen,N.B., Hansen,L.H. and Kot,W. 2020 — GenBank