Protein

View in Explore
Genbank accession
QPB09558.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MALFNLPASVPTVTLHGKYLGPDGRPLSGWVEILAPIPLTFPNADAFVTGPVIVPLDSEGTFAVTLPATDVAGSNPTDWAYWITEKLQGVNDRKPYAIKLPQALKDPWLDDLAPTDPGTPNYVGVEGARIYQGTDVPPAGLGRHGDMYVRTDVTAAFLNVSDTRVTTYAKVDATWVLQTGEVRGSKIYVNNTSTSSSATKPGDLLIRSDNGDFYQRDAAGWGAVKGNLKGPKGDKGDTGATGAASTVPGPKGDKGDTGATGAAGADGSKVYAFASGTEASGKGVPGDFAIRTDTGNVYLYELPTGWTSKGSIKGPKGDTGAQGPQGVPGQNGTGSGTVNAVNGVQPDGTGLVTLTPANVGALPLTGGTIQPASGNGLTVYGATSGAIPTNYFRVTADGHTYSNSLRNTFYNIGVGDTSADFAGGNRALAFQNATVIPTTNPANGVVAYSEGGVLKVRQSDGTIVTVGSGGVTSVNSKTGAVTLAASDVGALATSDKGATNGVASLVSGKVPIAQIPTTVTGSKNEWSPSALGFAAWTVDPASTVAYTATASKYTRVGRIFYAGFNITEDTQVNSVVMFARGYGGIAAYTVLAGIYRENGTAVSRMTTAVSPPSAGQVSGSPSQMVDNHFGAVPIKLTATVTLTPGRYWGAWMQKAGGASDFAYHHVANDGYAADNFYLGTAFARAWYVDGQSALPTTANQAVGLIDHDRPVMALALT
Physico‐chemical
properties
protein length:717 AA
molecular weight: 73369,68410 Da
isoelectric point:5,85717
aromaticity:0,08368
hydropathy:-0,11841

Domains

Domains [InterPro]
DC_1109
ATT
1–200
DC_1109 DC_2308
QPB09558.1
1 717
Architecture
ATT
STR
ATT 1-200 | STR 347-587 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptomyces phage Sycamore
[NCBI] 		2767589 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptomyces sp.
[NCBI] 		1931 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Kitasatosporales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPB09558.1 [NCBI]
Genbank nucleotide accession
MT701593.1 [NCBI]
CDS location
range 13692 -> 15845
strand +
CDS
ATGGCACTGTTTAACCTCCCTGCCTCGGTCCCTACGGTGACCCTGCACGGAAAGTATCTCGGGCCGGACGGCCGACCGCTCAGCGGTTGGGTTGAGATCCTGGCCCCAATCCCCCTCACGTTCCCGAACGCCGACGCGTTCGTTACCGGTCCGGTCATTGTCCCGCTGGACTCCGAGGGAACGTTTGCCGTAACGCTACCGGCCACGGACGTTGCGGGCAGTAACCCCACCGATTGGGCTTACTGGATTACCGAAAAGCTACAGGGTGTCAACGACCGCAAGCCTTATGCCATCAAGCTACCGCAGGCCCTCAAGGACCCGTGGCTAGATGACCTTGCGCCGACCGACCCCGGAACCCCCAACTACGTTGGCGTAGAGGGTGCCCGCATCTATCAGGGTACCGACGTTCCGCCCGCTGGCCTCGGTCGCCACGGTGACATGTACGTCCGCACCGACGTAACCGCCGCGTTCCTCAACGTGTCGGACACGCGCGTCACGACGTACGCCAAGGTTGACGCTACGTGGGTACTCCAGACCGGCGAGGTTCGCGGATCTAAGATCTACGTCAACAACACGTCTACCTCTAGCTCGGCTACCAAGCCCGGTGATCTCCTGATCCGCTCGGACAACGGAGACTTTTACCAGCGCGATGCGGCCGGTTGGGGTGCCGTCAAGGGCAACCTCAAGGGCCCCAAGGGAGACAAGGGCGACACCGGAGCAACGGGAGCCGCAAGCACGGTGCCCGGCCCCAAGGGCGACAAGGGCGATACCGGTGCGACCGGTGCCGCTGGTGCGGACGGAAGCAAGGTCTACGCGTTCGCCTCGGGTACGGAAGCGTCCGGCAAGGGTGTGCCCGGTGACTTCGCCATCCGCACCGACACCGGAAACGTCTACCTGTACGAGCTACCCACAGGGTGGACGAGCAAGGGCAGCATCAAGGGCCCAAAGGGCGACACGGGCGCACAGGGCCCGCAGGGTGTACCGGGGCAGAACGGTACCGGCTCGGGCACCGTGAACGCTGTGAACGGCGTACAGCCGGACGGAACGGGCCTCGTTACCCTGACCCCCGCGAACGTTGGCGCGCTGCCTCTGACGGGCGGCACTATCCAGCCTGCCAGCGGTAACGGTCTCACCGTTTACGGGGCAACCTCGGGTGCCATCCCGACCAACTATTTCCGCGTGACCGCCGATGGCCACACGTACAGCAACAGCCTACGAAACACGTTCTACAACATCGGAGTTGGCGACACGTCGGCCGATTTCGCCGGGGGTAACCGCGCTCTCGCATTCCAGAACGCAACGGTTATCCCAACGACCAACCCGGCAAACGGAGTTGTGGCGTACTCCGAGGGTGGCGTGTTGAAGGTTCGCCAGTCTGACGGCACGATCGTTACGGTTGGCTCGGGCGGGGTTACCTCGGTCAACAGCAAGACCGGCGCGGTAACGCTTGCCGCCTCGGATGTTGGCGCGCTGGCCACCTCGGACAAGGGCGCGACGAACGGCGTTGCCTCGCTGGTCAGCGGTAAGGTTCCGATAGCGCAGATCCCAACGACCGTCACCGGCTCTAAGAACGAGTGGAGCCCGAGCGCTCTAGGGTTCGCCGCATGGACGGTTGACCCCGCAAGTACGGTTGCCTACACCGCAACTGCCAGCAAGTACACGCGAGTTGGCCGCATCTTCTACGCAGGCTTCAACATCACCGAGGACACACAGGTTAACTCGGTCGTGATGTTCGCCCGAGGGTATGGCGGTATCGCCGCGTACACCGTGCTTGCCGGAATCTACCGGGAGAACGGTACGGCGGTATCCCGCATGACAACCGCCGTGTCTCCCCCGTCCGCTGGACAGGTCAGCGGTTCCCCGTCACAGATGGTGGACAACCACTTTGGCGCTGTGCCGATCAAGCTAACCGCAACGGTCACGCTTACGCCCGGTCGCTACTGGGGCGCGTGGATGCAAAAGGCGGGCGGCGCGTCTGACTTCGCGTACCACCACGTAGCTAACGACGGTTACGCCGCTGACAACTTCTACCTAGGTACCGCGTTCGCGCGTGCCTGGTACGTCGATGGACAGTCGGCGCTACCGACCACGGCTAACCAGGCTGTTGGACTCATCGACCATGACCGCCCGGTTATGGCGCTAGCACTCACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2add9432c6bca6750e7842994fdb8f16bc9fe62f390881a656c1c9160212ec5f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6932
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Streptomyces phage Sycamore Zhang,X.-H., Rivera,M., Marquez,A., Clark,J.D., Hernandez,I., Liu,M. and Burrowes,B.H. 2021-01-07 — GenBank