Protein

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Genbank accession
QNJ51990.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,84
Protein sequence
MRNKKLSVNIDNSDLVNYPNGRIKNNSGAGDGTPVNEFMYGDLHEFKDKLMRLAGIEHNGLPDNEQNSFQSIEALRDFGSKHDVIQTLTTASGVITVSAKLNTIIQNNESLICKAGFNYTTETSIKGGDGTVYSLTVIGNFKTNEYVRLIKKDSGVVLVRLVDSVSADAVISELLFLKKASQAQENAGTLDTVATTPLTNKTVFGLRVNDNTASAPYLASASQNGIYPKEHFKIVENLISPIKNRGWIGGFDIGGTTGSLPVNGDIISATSTISTNGDSFILCAMSNAMANNNYVVKMYVESLGDLGLDNDSFCPAFKVISTTQFTITLTEGYSSVQNIKIHVEIQQL
Physico‐chemical
properties
protein length:348 AA
molecular weight: 37598,91690 Da
isoelectric point:5,44599
aromaticity:0,07184
hydropathy:-0,14540

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QNJ51990.1
1 348
Domain Start End Length (AA) Confidence
N-terminal 1 223 223 0,9364
Central domain 224 337 115 0,0093
C-terminal 338 348 10 0,9969
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-223
Central
224-337
C-terminal
338-348

Taxonomy

  Name Taxonomy ID Lineage
Phage Flavobacterium phage FCOV-F19
[NCBI] 		2764960 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Flavobacterium columnare
[NCBI] 		996 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNJ51990.1 [NCBI]
Genbank nucleotide accession
MT585285 [NCBI]
CDS location
range 23111 -> 24157
strand +
CDS
ATGAGAAATAAAAAATTAAGCGTTAATATTGATAATTCTGATTTGGTAAATTATCCAAATGGACGAATAAAAAATAATAGCGGTGCGGGTGATGGAACGCCAGTAAATGAATTTATGTATGGTGATTTACACGAGTTTAAAGATAAGTTGATGAGATTGGCGGGTATTGAGCATAATGGATTGCCAGATAATGAACAAAATAGTTTTCAATCAATAGAAGCGTTGAGAGATTTTGGAAGTAAACACGATGTAATACAAACTTTAACTACTGCTTCTGGTGTTATAACTGTTTCAGCTAAATTAAACACAATCATTCAAAATAACGAAAGTTTAATTTGTAAAGCAGGATTTAATTATACAACAGAAACAAGTATAAAGGGAGGTGATGGAACTGTTTACTCATTAACTGTAATAGGTAATTTTAAAACAAATGAGTATGTACGATTAATTAAAAAAGATTCTGGTGTTGTGCTTGTTAGATTAGTCGATTCTGTTAGTGCAGATGCTGTTATTAGTGAATTGTTGTTTTTGAAAAAAGCATCGCAAGCTCAAGAAAACGCAGGTACATTAGATACTGTTGCAACAACGCCATTGACTAATAAAACTGTATTTGGATTAAGGGTAAACGACAATACAGCTAGTGCGCCTTATTTGGCTAGTGCTTCACAAAACGGAATTTACCCTAAGGAGCATTTCAAGATAGTAGAGAATTTAATCAGCCCAATAAAAAACAGAGGCTGGATAGGCGGGTTTGATATTGGTGGAACTACAGGTAGTTTACCAGTTAATGGAGACATAATAAGTGCTACATCTACTATTTCAACTAATGGAGATTCGTTTATATTATGCGCAATGTCTAATGCTATGGCAAATAATAATTATGTTGTTAAAATGTATGTAGAGAGCTTGGGAGATTTGGGGCTAGACAATGACTCATTTTGCCCTGCCTTTAAAGTTATAAGTACTACTCAATTTACAATAACATTGACGGAAGGTTACTCTAGTGTGCAAAATATAAAAATTCACGTAGAAATTCAACAATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c27fab1da553f9a72226f41781201cbd8e212bd404df215fa33f5a5d40272e5b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7129
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Repeated isolation of genetically similar Flavobacterium columnare phages with a strong potential for pathogen control Runtuvuori-Salmela,A., Kunttu,H.M.T., Laanto,E., Almeida,G.M.F., Makela,K., Middelboe,M. and Sundberg,L.-R. 2020-09-23 — GenBank