Protein

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Genbank accession
UPT53197.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTTVPTITPLTTPVPTTDDPTNFQSRADVLVSELPTMVTQQNLAITAMNTVAGEVAASASAVAASEIAAEAAAAAAASTSSYFATSTTSLSVGSGVKAFTLAQTGKAFANGDDVTAFSRSNVGNRIRGPASSVNSGTGAITITVPADGFAGSGTVSDWIVVHSLFAALLEGLAADILLGTSRVAALTPDAIYDALAEVTLIDATTVAVDMSTFINAKVTLGGNRTLGNPTNAKPGQTGRIRVIQDGTGSRTLAFSSNWKRQGGAPTLTTTAAAYDVIVYDVIASNIILYDLIRNPS
Physico‐chemical
properties
protein length:296 AA
molecular weight: 30034,32820 Da
isoelectric point:4,71095
aromaticity:0,05405
hydropathy:0,26554

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Yong-M4-211
[NCBI] 		2928849 No lineage information
Host Synechococcus sp. PCC 7002
[NCBI] 		32049 Cyanobacteriota > Cyanophyceae > Chroococcales > Geminocystaceae > Picosynechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPT53197.1 [NCBI]
Genbank nucleotide accession
OM868079.1 [NCBI]
CDS location
range 36315 -> 37205
strand -
CDS
GTGACCACTGTCCCAACGATCACCCCGCTGACGACGCCGGTCCCGACGACCGACGACCCGACGAACTTCCAGTCGCGCGCCGATGTGCTGGTTTCCGAACTGCCGACGATGGTGACGCAGCAGAACCTGGCCATTACGGCGATGAATACGGTGGCCGGGGAGGTTGCAGCGAGCGCCAGTGCAGTGGCGGCGTCTGAGATTGCGGCGGAAGCCGCAGCGGCGGCCGCCGCGTCGACCTCCAGCTACTTCGCCACGTCGACCACCTCACTCTCTGTGGGTTCCGGCGTAAAGGCCTTCACGCTGGCTCAGACGGGCAAGGCTTTCGCCAATGGGGACGACGTAACGGCCTTCAGCCGATCCAACGTTGGCAATCGCATCCGCGGCCCGGCCAGCAGCGTCAACTCCGGCACCGGCGCGATCACGATCACCGTGCCGGCGGACGGCTTCGCAGGTTCGGGGACGGTTTCGGACTGGATCGTGGTGCACTCGCTCTTCGCCGCGTTGCTCGAAGGCTTGGCAGCGGACATCCTGCTCGGGACCAGCCGCGTCGCAGCGCTGACTCCCGACGCGATCTACGACGCCCTGGCTGAGGTGACGCTGATCGACGCGACCACGGTGGCGGTGGACATGTCCACCTTCATCAACGCGAAGGTGACCTTGGGCGGCAACCGGACGCTGGGGAACCCCACGAACGCGAAGCCCGGCCAGACTGGCCGGATTCGCGTGATCCAGGATGGCACCGGCTCGCGCACGCTGGCCTTCAGCTCCAACTGGAAGCGCCAGGGCGGGGCGCCCACGCTGACCACCACGGCCGCGGCCTACGACGTCATCGTGTATGACGTGATCGCCTCAAACATCATCCTCTACGATCTGATCCGGAACCCGTCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ce193519d1c30001afae8331a67ddb4a24d3e161538fdf7a10530eddad4e77aa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9241
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis of Synechococcus cyanophage Yong-M4-211 Pan,L., Li,D., Lin,W., Qu,C., Cai,R., Qian,M., Wang,F., Zhou,Q., Liu,W. and Tong,Y. 2024-11 — GenBank