Protein

View in Explore
Genbank accession
XHB23493.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,76
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADQNLKQIQFKRTSTENKAPGADIVARGEIALNTHGRTLAIYTKDENDAVVQLAGKGVPFLDTSGTLSVDGTTTLKDNVTISPNKAISFETTDLSGEITRHIVGKCATNDGWYIGAGGTSNSGILEIGTIDDGAETIQFVQRGAGNVEARKLVLLDGSGNTTLPGDLRLSTNKTVKINSGSTLVLEMGVGSNDVYIKNQRGTGVLQLTNDSNLTFRNSQVYYAMSGRGPGKSGTLLTNVENNRQAWQYTISAATASTARWVKVATIKHPGMASSQLDLMISGGIDSGHGRHYVDFITLSGRNLTSWSTNSLDNWVEWRRVGSPSKTNVPEYYVVKNDSATDADASFDFYAKIPRYGNGLYVTVLNTAGYNGQDSGTVIIYETNQDTGDTGPSGSILVSMKQIFDSLAKPDFGDTTGTLPVNRGGTGATNAGDARNNLGLRTAAVRDVGESNGNLMEVGAFGIGGNGKSLVDITSDVDLMTRLKALGGTVFRANTASGYTGAPYYSHGTGFYGRASDTMAALNIDYATGNVRVFAINDSGLASGRVNSNVLYGTANKPSKADVGLGNLTNDTQVKKAGDTMTGDLTAPNFHASGPGTASFYVNAGTGNAHVWFRTDANERGVIWATPNTADLGQINIRAKTTGGTSAGDFSFRSDGRFDVPVAVKVGGAAMLTKDGNITSGSMFGGNLNNYLTSIKNDITAGDNKQVSKTGDTMTGNLTINANLKVENPNGTFVDLGSENSDKYSRLTLARKAGSGAAVAMLKITPEGYVQFGYQDAVATPSPSKYIRVKPDGLDVEGDLVFNQTYRGTEEAVDISDKTVDLNSLVIKRTDPGTRQLYKCVSSGGGNNISNKPTSDGNFVLEVLSLRKVSDTDWSCKQTFTTKNGGVEGTYIRYAQNGSWSAWKEVVAGVQPINLGGTGATSVAAARNNLGVGEGQTVSFGNLVTNDLTANGNARLVGRLNLGSTSATGVLRANETGAVVLGSASGQNIHIRAGSPDTSTGETRFEPNGNVLVGGVLTSSGSLQVNGEATMGRSLIVSQNIKNTNDNSFILMGKDSDLGFVKKSGAGSKLVFASGKTFTVAKSSATAIANPASETYTDVFKVDADGNQTVYGNAQVNRQLTVSSSATVNGIINANGGIIVPTTKYVQIADAPTQNNQATNKKYVDDKVASAISNAGDTYLPLAGGTVTGPLNITGNQLKTTSLWVTGNSALNGALEVGGNVVSNTGIGSFIGAVDVKAPAADNGTTHLWFRHSNGGERGVIYMPRDNNTMMGLRAGGSEWQLDGPTGQMLGPGARWRIHSDGNLQGDVYGGYITNYINDRFNQCAQWVRTGAQQDFGPIGRPAPGKTVPGGWVLVGLNGNSNEANQNMQLIGGRLQVWKPGVEWVDSAT
Physico‐chemical
properties
protein length:1389 AA
molecular weight: 145584,68100 Da
isoelectric point:6,89488
aromaticity:0,06839
hydropathy:-0,31533

Domains

Domains [InterPro]
DC_1942
ATT
4–618
DC_1942 cd19958 DC_0749
DC_0468
STR
483–1147
DC_0468
XHB23493.1
1 1389
Architecture
ATT
STR
RBD
ATT 4-618 | STR 619-1147 | RBD 1148-1376 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XHB23493.1
1 1389
Domain Start End Length (AA) Confidence
N-terminal 1 1055 1055 0,1620
Central domain 1056 1254 200 0,3244
C-terminal 1255 1389 134 0,8940
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-1055
Central
1056-1254
C-terminal
1255-1389

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_Kpn529046-KEN39
[NCBI] 		3142667 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHB23493.1 [NCBI]
Genbank nucleotide accession
PP723046.1 [NCBI]
CDS location
range 57836 -> 62005
strand +
CDS
ATGGCCGATCAAAACTTAAAACAAATACAATTTAAAAGAACTAGCACAGAGAATAAAGCACCAGGTGCAGATATCGTAGCCCGTGGCGAAATCGCTTTGAATACACATGGGCGTACTCTTGCCATTTATACTAAAGATGAAAATGATGCCGTAGTACAGCTCGCCGGTAAAGGGGTTCCTTTCTTAGATACCTCCGGAACTCTTAGCGTTGATGGAACTACTACGTTAAAAGACAACGTAACTATTTCTCCGAATAAAGCAATTAGTTTTGAAACTACTGATTTGAGCGGTGAAATAACTCGTCATATCGTTGGCAAATGTGCTACTAATGATGGCTGGTACATTGGTGCCGGCGGTACAAGCAACAGTGGTATTCTTGAAATCGGTACTATTGATGATGGCGCTGAAACTATTCAATTCGTACAACGCGGTGCAGGCAACGTTGAAGCCCGAAAATTGGTCTTGCTTGACGGCTCTGGTAATACGACTCTTCCTGGCGATTTAAGATTATCTACCAATAAGACTGTTAAAATTAACAGTGGAAGCACTCTTGTTCTTGAAATGGGTGTAGGCTCTAACGACGTCTATATTAAAAACCAAAGAGGCACGGGTGTTCTTCAATTAACTAATGACAGTAATTTAACGTTCAGAAATTCACAGGTGTATTACGCTATGAGCGGAAGAGGTCCTGGTAAATCCGGTACTCTTCTGACGAATGTAGAAAACAATCGTCAAGCCTGGCAATATACTATTTCTGCTGCAACTGCGTCAACTGCTCGCTGGGTAAAAGTAGCTACAATAAAGCATCCAGGAATGGCTTCTTCGCAACTGGATTTAATGATTAGCGGTGGTATTGATTCTGGGCACGGTAGACATTACGTTGATTTTATCACGTTATCAGGACGAAATTTAACATCATGGAGCACCAACAGTTTAGATAACTGGGTTGAATGGCGCCGGGTTGGGTCTCCTTCTAAAACGAACGTTCCAGAGTATTACGTTGTTAAAAACGATTCTGCTACTGATGCGGATGCGTCATTTGATTTTTATGCTAAGATTCCTCGTTATGGCAATGGCCTTTATGTTACAGTGCTAAACACAGCTGGATACAACGGCCAAGATTCAGGTACAGTAATTATCTATGAAACCAATCAGGACACTGGTGATACTGGACCGTCTGGAAGTATTCTTGTTTCAATGAAACAGATTTTTGATAGTTTAGCAAAACCAGATTTCGGCGATACTACAGGTACTCTTCCGGTTAACCGAGGTGGTACGGGTGCTACTAACGCAGGAGACGCTCGAAATAACTTAGGTCTTAGAACTGCAGCTGTTCGCGATGTTGGTGAATCTAACGGAAACTTGATGGAAGTTGGTGCCTTTGGTATTGGCGGTAACGGAAAATCACTGGTAGATATTACTTCTGACGTTGATTTAATGACTCGCCTTAAGGCTCTTGGTGGTACAGTGTTCAGAGCCAACACAGCGAGTGGTTATACTGGGGCTCCTTATTACTCCCATGGCACCGGGTTTTATGGAAGAGCTTCTGACACAATGGCTGCGCTTAATATAGATTATGCAACTGGTAACGTCAGAGTATTTGCTATAAACGATAGCGGTTTAGCAAGTGGAAGAGTAAATTCTAATGTTCTCTACGGTACAGCAAATAAACCGTCTAAGGCTGACGTTGGGCTTGGTAATCTGACAAACGACACCCAGGTTAAGAAAGCTGGCGACACCATGACTGGTGATTTAACTGCTCCTAACTTCCACGCTTCTGGACCTGGAACTGCATCTTTTTACGTTAATGCTGGGACTGGAAACGCTCATGTATGGTTCAGAACGGATGCTAACGAACGCGGTGTAATTTGGGCAACTCCAAATACAGCGGACTTAGGACAAATTAATATTCGTGCAAAAACTACTGGAGGCACTTCTGCCGGTGATTTTAGCTTCCGTTCTGACGGTCGATTTGATGTTCCTGTAGCAGTTAAAGTTGGTGGGGCAGCAATGCTAACCAAAGATGGGAATATTACCTCTGGTTCAATGTTTGGCGGTAACCTTAACAACTATTTGACTTCTATTAAAAATGATATCACTGCTGGCGATAATAAGCAAGTAAGCAAGACTGGTGATACCATGACCGGTAATTTGACTATTAACGCTAACTTAAAAGTCGAAAACCCTAACGGAACTTTTGTTGATTTAGGTTCAGAGAACTCAGACAAGTACAGCAGATTGACCCTTGCACGTAAAGCTGGCTCTGGTGCTGCCGTAGCAATGCTTAAAATCACTCCTGAAGGATACGTGCAATTTGGTTATCAAGATGCAGTTGCTACTCCGTCTCCTAGCAAGTACATCCGAGTTAAACCTGATGGTCTTGATGTAGAAGGTGATTTGGTTTTTAATCAGACATATCGCGGCACCGAAGAGGCAGTTGATATTTCTGATAAGACTGTTGACCTTAATAGCCTGGTTATTAAAAGAACCGACCCAGGTACTCGTCAGCTGTATAAATGTGTATCTTCTGGCGGCGGAAATAATATATCGAACAAACCTACCTCTGATGGCAACTTTGTTCTTGAAGTTCTGTCTTTACGCAAGGTTTCTGATACCGATTGGTCATGTAAACAAACCTTTACTACAAAGAATGGCGGTGTTGAAGGTACATATATCCGCTACGCACAAAACGGCTCATGGTCTGCGTGGAAAGAGGTTGTTGCGGGTGTTCAACCGATTAATTTAGGTGGTACTGGAGCAACTTCTGTAGCTGCTGCTCGTAATAATCTTGGTGTTGGTGAAGGACAAACTGTATCATTCGGTAATTTAGTTACCAACGACTTAACTGCAAACGGAAACGCTAGATTGGTTGGAAGACTGAACCTTGGTTCTACTTCTGCGACTGGCGTATTACGAGCTAATGAAACTGGTGCGGTTGTCTTAGGTTCTGCTAGTGGTCAAAACATCCACATCAGAGCAGGAAGCCCCGATACTTCTACTGGTGAAACCCGCTTTGAGCCAAATGGAAACGTTTTAGTTGGTGGAGTTCTGACGTCTTCAGGAAGCTTGCAAGTAAATGGCGAAGCCACGATGGGCAGAAGCTTGATCGTTTCTCAAAACATAAAGAATACTAACGATAATAGTTTTATTCTGATGGGAAAAGATTCTGACCTGGGTTTCGTTAAAAAATCTGGTGCAGGTTCTAAACTGGTCTTTGCTTCAGGAAAAACATTCACTGTTGCTAAATCATCAGCAACTGCCATAGCTAATCCAGCTTCGGAAACTTACACTGATGTGTTTAAAGTTGACGCTGATGGAAACCAAACCGTTTACGGAAATGCCCAAGTTAACAGACAGTTAACTGTTTCTAGCTCAGCAACTGTTAATGGTATTATTAACGCAAACGGCGGTATTATTGTTCCTACTACCAAGTATGTGCAAATTGCCGATGCTCCTACACAGAATAACCAAGCCACCAACAAAAAATATGTTGATGACAAGGTTGCTTCTGCTATTAGTAATGCTGGCGACACGTATCTTCCGTTGGCGGGTGGTACTGTAACTGGTCCATTAAATATTACTGGAAACCAGTTAAAAACCACATCGCTCTGGGTTACTGGAAATTCGGCTCTTAATGGTGCTTTAGAAGTAGGTGGTAATGTTGTTAGTAATACTGGTATTGGCAGCTTTATTGGTGCTGTAGATGTTAAGGCTCCTGCTGCAGATAATGGTACAACACACCTTTGGTTCCGACATTCTAACGGTGGTGAGCGTGGTGTGATTTATATGCCGCGTGACAATAATACCATGATGGGATTAAGAGCTGGCGGTAGTGAGTGGCAATTGGATGGTCCGACAGGTCAAATGCTAGGACCAGGAGCACGGTGGAGAATTCATTCTGATGGTAACCTACAGGGTGATGTTTACGGTGGTTATATCACTAACTATATCAACGATAGGTTTAACCAATGTGCTCAATGGGTTCGTACTGGTGCTCAACAAGACTTTGGTCCAATTGGTCGTCCAGCACCTGGTAAAACTGTTCCTGGTGGTTGGGTGCTTGTTGGTCTTAATGGTAACAGCAACGAAGCTAACCAGAACATGCAACTTATCGGCGGACGGTTACAGGTATGGAAACCCGGTGTCGAATGGGTTGATTCTGCGACTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
7bff39c99fdc8747fb75178f0218a25f24ce4fe13765c8fbc6793661c8932597
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5145
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequences of Five Klebsiella Phages That Belong to the Genus Jiaodavirus Burke,K.A., Peters,T.L., Kirillina,O.A., Urick,C.D., Mzhavia,N., Musila,L., Nikolich,M.P. and Filippov,A.A. 2024-12-12 — GenBank