Protein

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Genbank accession
XYS97638.1 [GenBank]
Protein name
PAAR domain-containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPGAARLNDKCTGHGCYSSRPNVEASSDVFTNDLGAHRQGDAWASHSCFTSHSGNLASGSGTVWINDKQAGRIGDPVSCGSSVLTGSSDVFIGP
Physico‐chemical
properties
protein length:94 AA
molecular weight: 9627,35820 Da
isoelectric point:5,98812
aromaticity:0,06383
hydropathy:-0,34787

Domains

Domains [InterPro]
cd14737
STR
2–93
cd14737
G3DSA:2.60.200.60
STR
3–92
G3DSA:2.60.200.60
IPR008727
STR
50–93
IPR008727
XYS97638.1
1 94
Architecture
STR
STR 2-93 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYS97638.1
1 94
Domain Start End Length (AA) Confidence
N-terminal 1 63 63 0,0654
Central domain 64 83 21 0,0072
C-terminal 84 94 10 0,9854
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-63
Central
64-83
C-terminal
84-94

Taxonomy

  Name Taxonomy ID Lineage
Phage Sinorhizobium phage Phosso
[NCBI] 		3435197 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYS97638.1 [NCBI]
Genbank nucleotide accession
PV764938 [NCBI]
CDS location
range 350762 -> 351046
strand -
CDS
ATGCCAGGCGCAGCTCGTCTCAATGATAAATGCACGGGTCATGGCTGCTATAGCAGTCGTCCCAATGTGGAAGCTTCTTCGGATGTATTCACAAATGATTTGGGCGCACACCGTCAGGGTGATGCTTGGGCTTCCCATAGCTGCTTCACTTCTCACAGTGGCAACCTTGCTTCGGGTAGCGGAACCGTATGGATCAACGATAAGCAAGCGGGTCGTATCGGTGATCCCGTAAGCTGCGGTTCTTCCGTACTAACGGGTTCCTCTGATGTTTTCATCGGCCCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
07826a3bdcd543b02745ffd851e5c7dfc3cfc624e835d9525c4d2341ef02a81e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9738
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50